Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.47■□□□□ 0.71
ATRXP46100 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.47■□□□□ 0.71
ATRXP46100 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 KRT18P48-201ENST00000434763 852 ntBASIC19.47■□□□□ 0.71
ATRXP46100 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.47■□□□□ 0.71
ATRXP46100 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.47■□□□□ 0.71
ATRXP46100 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.47■□□□□ 0.71
ATRXP46100 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.47■□□□□ 0.71
ATRXP46100 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.47■□□□□ 0.71
ATRXP46100 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATRXP46100 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.46■□□□□ 0.71
ATRXP46100 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRXP46100 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.46■□□□□ 0.71
ATRXP46100 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.46■□□□□ 0.71
ATRXP46100 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
ATRXP46100 EEF1DP3-203ENST00000566025 782 ntBASIC19.46■□□□□ 0.71
ATRXP46100 AC145285.6-201ENST00000604632 637 ntBASIC19.46■□□□□ 0.71
ATRXP46100 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATRXP46100 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
ATRXP46100 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.45■□□□□ 0.7
ATRXP46100 AC006557.6-201ENST00000623071 864 ntBASIC19.45■□□□□ 0.7
ATRXP46100 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRXP46100 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.45■□□□□ 0.7
ATRXP46100 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.45■□□□□ 0.7
ATRXP46100 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRXP46100 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.45■□□□□ 0.7
ATRXP46100 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATRXP46100 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRXP46100 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 AC091076.1-201ENST00000610741 619 ntBASIC19.44■□□□□ 0.7
ATRXP46100 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRXP46100 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATRXP46100 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.44■□□□□ 0.7
ATRXP46100 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.44■□□□□ 0.7
ATRXP46100 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ATRXP46100 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.44■□□□□ 0.7
ATRXP46100 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATRXP46100 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATRXP46100 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATRXP46100 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 AC087388.1-201ENST00000571370 1112 ntBASIC19.43■□□□□ 0.7
ATRXP46100 AC069544.1-201ENST00000609399 999 ntBASIC19.43■□□□□ 0.7
ATRXP46100 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATRXP46100 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATRXP46100 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.43■□□□□ 0.7
ATRXP46100 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATRXP46100 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.43■□□□□ 0.7
ATRXP46100 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATRXP46100 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
ATRXP46100 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.42■□□□□ 0.7
ATRXP46100 AC113347.1-201ENST00000413321 391 ntBASIC19.42■□□□□ 0.7
ATRXP46100 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ATRXP46100 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.42■□□□□ 0.7
ATRXP46100 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.42■□□□□ 0.7
ATRXP46100 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATRXP46100 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATRXP46100 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATRXP46100 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms