Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTR3AP46098 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HTR3AP46098 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTR3AP46098 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTR3AP46098 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.41■□□□□ 0.7
HTR3AP46098 AC007952.6-201ENST00000573168 2673 ntBASIC19.41■□□□□ 0.7
HTR3AP46098 AC003957.1-201ENST00000625108 2673 ntBASIC19.41■□□□□ 0.7
HTR3AP46098 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.41■□□□□ 0.7
HTR3AP46098 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.41■□□□□ 0.7
HTR3AP46098 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 IRS3P-201ENST00000223076 1006 ntBASIC19.4■□□□□ 0.7
HTR3AP46098 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.4■□□□□ 0.7
HTR3AP46098 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.4■□□□□ 0.7
HTR3AP46098 AC105265.2-201ENST00000467189 838 ntBASIC19.4■□□□□ 0.7
HTR3AP46098 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HTR3AP46098 AC012414.1-201ENST00000556676 535 ntBASIC19.4■□□□□ 0.7
HTR3AP46098 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.4■□□□□ 0.7
HTR3AP46098 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HTR3AP46098 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HTR3AP46098 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HTR3AP46098 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.39■□□□□ 0.69
HTR3AP46098 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.39■□□□□ 0.69
HTR3AP46098 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HTR3AP46098 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HTR3AP46098 AP006587.3-201ENST00000525742 1516 ntBASIC19.39■□□□□ 0.69
HTR3AP46098 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.39■□□□□ 0.69
HTR3AP46098 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HTR3AP46098 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HTR3AP46098 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.38■□□□□ 0.69
HTR3AP46098 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HTR3AP46098 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.38■□□□□ 0.69
HTR3AP46098 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.38■□□□□ 0.69
HTR3AP46098 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.38■□□□□ 0.69
HTR3AP46098 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.38■□□□□ 0.69
HTR3AP46098 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HTR3AP46098 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.38■□□□□ 0.69
HTR3AP46098 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.38■□□□□ 0.69
HTR3AP46098 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3AP46098 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HTR3AP46098 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HTR3AP46098 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.37■□□□□ 0.69
HTR3AP46098 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.37■□□□□ 0.69
HTR3AP46098 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.37■□□□□ 0.69
HTR3AP46098 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HTR3AP46098 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.37■□□□□ 0.69
HTR3AP46098 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.37■□□□□ 0.69
HTR3AP46098 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.37■□□□□ 0.69
HTR3AP46098 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3AP46098 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.37■□□□□ 0.69
HTR3AP46098 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
HTR3AP46098 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HTR3AP46098 AC010542.4-201ENST00000563151 1910 ntBASIC19.37■□□□□ 0.69
HTR3AP46098 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
HTR3AP46098 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
HTR3AP46098 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.36■□□□□ 0.69
HTR3AP46098 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HTR3AP46098 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3AP46098 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.36■□□□□ 0.69
HTR3AP46098 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.36■□□□□ 0.69
HTR3AP46098 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HTR3AP46098 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
HTR3AP46098 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms