Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YPR012W	YPR012W	255 nt		4	□□□□□ -1.77
CAF16	P43569	ASM4	YDL088C	1587 nt		4	□□□□□ -1.77
CAF16	P43569	PIM1	YBL022C	3402 nt		4	□□□□□ -1.77
CAF16	P43569	YKL050C	YKL050C	2769 nt		4	□□□□□ -1.77
CAF16	P43569	MTR10	YOR160W	2919 nt		4	□□□□□ -1.77
CAF16	P43569	PEX6	YNL329C	3093 nt		4	□□□□□ -1.77
CAF16	P43569	NSA1	YGL111W	1392 nt		4	□□□□□ -1.77
CAF16	P43569	ITT1	YML068W	1395 nt		4	□□□□□ -1.77
CAF16	P43569	OSH2	YDL019C	3852 nt		3.99	□□□□□ -1.77
CAF16	P43569	NUG1	YER006W	1563 nt		3.99	□□□□□ -1.77
CAF16	P43569	ECM22	YLR228C	2445 nt		3.99	□□□□□ -1.77
CAF16	P43569	FAD1	YDL045C	921 nt		3.99	□□□□□ -1.77
CAF16	P43569	PCL5	YHR071W	690 nt		3.99	□□□□□ -1.77
CAF16	P43569	NSG1	YHR133C	876 nt		3.99	□□□□□ -1.77
CAF16	P43569	GCY1	YOR120W	939 nt		3.99	□□□□□ -1.77
CAF16	P43569	PRM3	YPL192C	402 nt		3.99	□□□□□ -1.77
CAF16	P43569	SAM4	YPL273W	978 nt		3.99	□□□□□ -1.77
CAF16	P43569	YCF1	YDR135C	4548 nt		3.99	□□□□□ -1.77
CAF16	P43569	RRB1	YMR131C	1536 nt		3.99	□□□□□ -1.77
CAF16	P43569	HOS3	YPL116W	2094 nt		3.99	□□□□□ -1.77
CAF16	P43569	TMA64	YDR117C	1698 nt		3.98	□□□□□ -1.77
CAF16	P43569	SKO1	YNL167C	1944 nt		3.98	□□□□□ -1.77
CAF16	P43569	SRD1	YCR018C	666 nt		3.98	□□□□□ -1.77
CAF16	P43569	CPR5	YDR304C	678 nt		3.98	□□□□□ -1.77
CAF16	P43569	FUR1	YHR128W	651 nt		3.98	□□□□□ -1.77
CAF16	P43569	YAL004W	YAL004W	648 nt		3.98	□□□□□ -1.77
CAF16	P43569	CSE4	YKL049C	690 nt		3.98	□□□□□ -1.77
CAF16	P43569	YHC1	YLR298C	696 nt		3.98	□□□□□ -1.77
CAF16	P43569	YNL184C	YNL184C	327 nt		3.98	□□□□□ -1.77
CAF16	P43569	YPR170W-A	YPR170W-A	186 nt		3.98	□□□□□ -1.77
CAF16	P43569	AKL1	YBR059C	3327 nt		3.98	□□□□□ -1.77
CAF16	P43569	PEP5	YMR231W	3090 nt		3.98	□□□□□ -1.77
CAF16	P43569	SNU56	YDR240C	1479 nt		3.98	□□□□□ -1.77
CAF16	P43569	AVT7	YIL088C	1473 nt		3.98	□□□□□ -1.77
CAF16	P43569	SPO23	YBR250W	1572 nt		3.97	□□□□□ -1.77
CAF16	P43569	TRM11	YOL124C	1302 nt		3.97	□□□□□ -1.77
CAF16	P43569	THI21	YPL258C	1656 nt		3.97	□□□□□ -1.77
CAF16	P43569	VIP1	YLR410W	3441 nt		3.97	□□□□□ -1.77
CAF16	P43569	DIP2	YLR129W	2832 nt		3.97	□□□□□ -1.77
CAF16	P43569	BRE5	YNR051C	1548 nt		3.97	□□□□□ -1.77
CAF16	P43569	YDR118W-A	YDR118W-A	117 nt		3.97	□□□□□ -1.77
CAF16	P43569	VPS74	YDR372C	1038 nt		3.97	□□□□□ -1.77
CAF16	P43569	YER084W-A	YER084W-A	513 nt		3.97	□□□□□ -1.77
CAF16	P43569	YGL039W	YGL039W	1047 nt		3.97	□□□□□ -1.77
CAF16	P43569	YHR212C	YHR212C	336 nt		3.97	□□□□□ -1.77
CAF16	P43569	ACF4	YJR083C	930 nt		3.97	□□□□□ -1.77
CAF16	P43569	MRPL13	YKR006C	795 nt		3.97	□□□□□ -1.77
CAF16	P43569	UBI4	YLL039C	1146 nt		3.97	□□□□□ -1.77
CAF16	P43569	YLR154W-F	YLR154W-F	141 nt		3.97	□□□□□ -1.77
CAF16	P43569	YAR060C	YAR060C	336 nt		3.97	□□□□□ -1.77
CAF16	P43569	YLR334C	YLR334C	381 nt		3.97	□□□□□ -1.77
CAF16	P43569	RPS16A	YMR143W	432 nt		3.97	□□□□□ -1.77
CAF16	P43569	YOR318C	YOR318C	306 nt		3.97	□□□□□ -1.77
CAF16	P43569	GWT1	YJL091C	1473 nt		3.97	□□□□□ -1.77
CAF16	P43569	HMG1	YML075C	3165 nt		3.97	□□□□□ -1.77
CAF16	P43569	TGL3	YMR313C	1929 nt		3.97	□□□□□ -1.77
CAF16	P43569	GDS1	YOR355W	1569 nt		3.97	□□□□□ -1.77
CAF16	P43569	RPG1	YBR079C	2895 nt		3.96	□□□□□ -1.77
CAF16	P43569	SMI1	YGR229C	1518 nt		3.96	□□□□□ -1.78
CAF16	P43569	YDR157W	YDR157W	402 nt		3.96	□□□□□ -1.78
CAF16	P43569	DPH1	YIL103W	1278 nt		3.96	□□□□□ -1.78
CAF16	P43569	SEN15	YMR059W	387 nt		3.96	□□□□□ -1.78
CAF16	P43569	YNL089C	YNL089C	477 nt		3.96	□□□□□ -1.78
CAF16	P43569	ATX1	YNL259C	222 nt		3.96	□□□□□ -1.78
CAF16	P43569	NOC2	YOR206W	2133 nt		3.96	□□□□□ -1.78
CAF16	P43569	VAC14	YLR386W	2643 nt		3.96	□□□□□ -1.78
CAF16	P43569	SHS1	YDL225W	1656 nt		3.96	□□□□□ -1.78
CAF16	P43569	YJR015W	YJR015W	1533 nt		3.95	□□□□□ -1.78
CAF16	P43569	VPS73	YGL104C	1461 nt		3.95	□□□□□ -1.78
CAF16	P43569	PEX10	YDR265W	1014 nt		3.95	□□□□□ -1.78
CAF16	P43569	ATP5	YDR298C	639 nt		3.95	□□□□□ -1.78
CAF16	P43569	YDR524W-C	YDR524W-C	90 nt		3.95	□□□□□ -1.78
CAF16	P43569	GIM4	YEL003W	336 nt		3.95	□□□□□ -1.78
CAF16	P43569	RPL9A	YGL147C	576 nt		3.95	□□□□□ -1.78
CAF16	P43569	RSR1	YGR152C	819 nt		3.95	□□□□□ -1.78
CAF16	P43569	AGE2	YIL044C	897 nt		3.95	□□□□□ -1.78
CAF16	P43569	ASI2	YNL159C	870 nt		3.95	□□□□□ -1.78
CAF16	P43569	MPD2	YOL088C	834 nt		3.95	□□□□□ -1.78
CAF16	P43569	RRG8	YPR116W	834 nt		3.95	□□□□□ -1.78
CAF16	P43569	YBR103C-A	YBR103C-A	144 nt		3.95	□□□□□ -1.78
CAF16	P43569	RPB5	YBR154C	648 nt		3.95	□□□□□ -1.78
CAF16	P43569	TCO89	YPL180W	2400 nt		3.95	□□□□□ -1.78
CAF16	P43569	SLM2	YNL047C	1971 nt		3.94	□□□□□ -1.78
CAF16	P43569	TDA1	YMR291W	1761 nt		3.94	□□□□□ -1.78
CAF16	P43569	CDC14	YFR028C	1656 nt		3.94	□□□□□ -1.78
CAF16	P43569	ULS1	YOR191W	4860 nt		3.94	□□□□□ -1.78
CAF16	P43569	YDL050C	YDL050C	372 nt		3.94	□□□□□ -1.78
CAF16	P43569	MIX14	YDR031W	366 nt		3.94	□□□□□ -1.78
CAF16	P43569	YGL088W	YGL088W	366 nt		3.94	□□□□□ -1.78
CAF16	P43569	MRM2	YGL136C	963 nt		3.94	□□□□□ -1.78
CAF16	P43569	VPS51	YKR020W	495 nt		3.94	□□□□□ -1.78
CAF16	P43569	TDA8	YAL064C-A	381 nt		3.94	□□□□□ -1.78
CAF16	P43569	APS1	YLR170C	471 nt		3.94	□□□□□ -1.78
CAF16	P43569	ARG80	YMR042W	534 nt		3.94	□□□□□ -1.78
CAF16	P43569	YMR173W-A	YMR173W-A	1185 nt		3.94	□□□□□ -1.78
CAF16	P43569	YOL114C	YOL114C	609 nt		3.94	□□□□□ -1.78
CAF16	P43569	DER1	YBR201W	636 nt		3.94	□□□□□ -1.78
CAF16	P43569	VMA1	YDL185W	3216 nt		3.94	□□□□□ -1.78
CAF16	P43569	SWC4	YGR002C	1431 nt		3.94	□□□□□ -1.78
CAF16	P43569	ATG2	YNL242W	4779 nt		3.94	□□□□□ -1.78

Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms