Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CTSKP43235 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSKP43235 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSKP43235 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.96■□□□□ 0.95
CTSKP43235 FAM201B-201ENST00000458407 597 ntBASIC20.96■□□□□ 0.95
CTSKP43235 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.96■□□□□ 0.95
CTSKP43235 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.96■□□□□ 0.95
CTSKP43235 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.96■□□□□ 0.95
CTSKP43235 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CTSKP43235 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CTSKP43235 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSKP43235 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CTSKP43235 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CTSKP43235 EP400NL-214ENST00000641289 2402 ntBASIC20.95■□□□□ 0.94
CTSKP43235 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.95■□□□□ 0.94
CTSKP43235 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTSKP43235 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
CTSKP43235 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CTSKP43235 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTSKP43235 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CTSKP43235 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.95■□□□□ 0.94
CTSKP43235 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSKP43235 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CTSKP43235 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
CTSKP43235 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CTSKP43235 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSKP43235 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.93■□□□□ 0.94
CTSKP43235 MIPEPP3-201ENST00000412105 444 ntBASIC20.93■□□□□ 0.94
CTSKP43235 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.93■□□□□ 0.94
CTSKP43235 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.93■□□□□ 0.94
CTSKP43235 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 OR10C1-204ENST00000622521 1039 ntBASIC20.93■□□□□ 0.94
CTSKP43235 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 MKRN4P-201ENST00000444706 1521 ntBASIC20.93■□□□□ 0.94
CTSKP43235 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTSKP43235 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSKP43235 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CTSKP43235 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
CTSKP43235 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSKP43235 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSKP43235 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSKP43235 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CTSKP43235 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSKP43235 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CTSKP43235 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
CTSKP43235 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.91■□□□□ 0.94
CTSKP43235 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.91■□□□□ 0.94
CTSKP43235 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CTSKP43235 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CTSKP43235 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.91■□□□□ 0.94
CTSKP43235 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.91■□□□□ 0.94
CTSKP43235 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSKP43235 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms