Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PFY1YOR122C 381 nt2.25□□□□□ -2.05
CUP9P41817 DSE3YOR264W 1293 nt2.25□□□□□ -2.05
CUP9P41817 SUR1YPL057C 1149 nt2.25□□□□□ -2.05
CUP9P41817 YPR078CYPR078C 1119 nt2.25□□□□□ -2.05
CUP9P41817 YDL199CYDL199C 2064 nt2.25□□□□□ -2.05
CUP9P41817 MET6YER091C 2304 nt2.25□□□□□ -2.05
CUP9P41817 PIN4YBL051C 2007 nt2.25□□□□□ -2.05
CUP9P41817 NSA1YGL111W 1392 nt2.24□□□□□ -2.05
CUP9P41817 NET1YJL076W 3570 nt2.24□□□□□ -2.05
CUP9P41817 CIK1YMR198W 1785 nt2.24□□□□□ -2.05
CUP9P41817 MST27YGL051W 705 nt2.24□□□□□ -2.05
CUP9P41817 YLL037WYLL037W 381 nt2.24□□□□□ -2.05
CUP9P41817 CCW14YLR390W-A 717 nt2.24□□□□□ -2.05
CUP9P41817 YMR310CYMR310C 954 nt2.24□□□□□ -2.05
CUP9P41817 YOL107WYOL107W 1029 nt2.24□□□□□ -2.05
CUP9P41817 SHG1YBR258C 429 nt2.24□□□□□ -2.05
CUP9P41817 TRM12YML005W 1389 nt2.23□□□□□ -2.05
CUP9P41817 YOR365CYOR365C 2112 nt2.23□□□□□ -2.05
CUP9P41817 ERP3YDL018C 678 nt2.23□□□□□ -2.05
CUP9P41817 FIN1YDR130C 876 nt2.23□□□□□ -2.05
CUP9P41817 PMI40YER003C 1290 nt2.23□□□□□ -2.05
CUP9P41817 AYR1YIL124W 894 nt2.23□□□□□ -2.05
CUP9P41817 END3YNL084C 1050 nt2.23□□□□□ -2.05
CUP9P41817 YNL109WYNL109W 546 nt2.23□□□□□ -2.05
CUP9P41817 DIA2YOR080W 2199 nt2.23□□□□□ -2.05
CUP9P41817 ITT1YML068W 1395 nt2.23□□□□□ -2.05
CUP9P41817 EXO84YBR102C 2262 nt2.22□□□□□ -2.05
CUP9P41817 MMS1YPR164W 4224 nt2.22□□□□□ -2.05
CUP9P41817 SCP160YJL080C 3669 nt2.22□□□□□ -2.05
CUP9P41817 EFG1YGR271C-A 702 nt2.22□□□□□ -2.05
CUP9P41817 SNX4YJL036W 1272 nt2.22□□□□□ -2.05
CUP9P41817 RSM26YJR101W 801 nt2.22□□□□□ -2.05
CUP9P41817 PSY1YKL076C 384 nt2.22□□□□□ -2.05
CUP9P41817 YKL156C-AYKL156C-A 117 nt2.22□□□□□ -2.05
CUP9P41817 YAL069WYAL069W 315 nt2.22□□□□□ -2.05
CUP9P41817 SRN2YLR119W 642 nt2.22□□□□□ -2.05
CUP9P41817 NDL1YLR254C 570 nt2.22□□□□□ -2.05
CUP9P41817 PIN3YPR154W 648 nt2.22□□□□□ -2.05
CUP9P41817 IRA2YOL081W 9240 nt2.22□□□□□ -2.05
CUP9P41817 PSK1YAL017W 4071 nt2.22□□□□□ -2.05
CUP9P41817 PEX6YNL329C 3093 nt2.21□□□□□ -2.05
CUP9P41817 HUL5YGL141W 2733 nt2.21□□□□□ -2.06
CUP9P41817 SRO77YBL106C 3033 nt2.21□□□□□ -2.06
CUP9P41817 RTT10YPL183C 3042 nt2.21□□□□□ -2.06
CUP9P41817 ICR1ICR1 3199 nt2.21□□□□□ -2.06
CUP9P41817 CAF120YNL278W 3183 nt2.21□□□□□ -2.06
CUP9P41817 MON1YGL124C 1935 nt2.21□□□□□ -2.06
CUP9P41817 MSS4YDR208W 2340 nt2.21□□□□□ -2.06
CUP9P41817 ERG28YER044C 447 nt2.21□□□□□ -2.06
CUP9P41817 AIM11YER093C-A 414 nt2.21□□□□□ -2.06
CUP9P41817 YGR160WYGR160W 612 nt2.21□□□□□ -2.06
CUP9P41817 STE11YLR362W 2154 nt2.21□□□□□ -2.06
CUP9P41817 RCE1YMR274C 948 nt2.21□□□□□ -2.06
CUP9P41817 YNL184CYNL184C 327 nt2.21□□□□□ -2.06
CUP9P41817 YPL035CYPL035C 348 nt2.21□□□□□ -2.06
CUP9P41817 VPS28YPL065W 729 nt2.21□□□□□ -2.06
CUP9P41817 ARO7YPR060C 771 nt2.21□□□□□ -2.06
CUP9P41817 MRP2YPR166C 348 nt2.21□□□□□ -2.06
CUP9P41817 SLN1YIL147C 3663 nt2.21□□□□□ -2.06
CUP9P41817 REV3YPL167C 4515 nt2.21□□□□□ -2.06
CUP9P41817 RIX1YHR197W 2292 nt2.2□□□□□ -2.06
CUP9P41817 KEL2YGR238C 2649 nt2.2□□□□□ -2.06
CUP9P41817 YER147C-AYER147C-A 411 nt2.2□□□□□ -2.06
CUP9P41817 GET1YGL020C 708 nt2.2□□□□□ -2.06
CUP9P41817 YHR052W-AYHR052W-A 195 nt2.2□□□□□ -2.06
CUP9P41817 YHR054W-AYHR054W-A 195 nt2.2□□□□□ -2.06
CUP9P41817 EPT1YHR123W 1176 nt2.2□□□□□ -2.06
CUP9P41817 YAL037WYAL037W 804 nt2.2□□□□□ -2.06
CUP9P41817 RAD10YML095C 633 nt2.2□□□□□ -2.06
CUP9P41817 RPL20AYMR242C 519 nt2.2□□□□□ -2.06
CUP9P41817 TMN3YER113C 2121 nt2.2□□□□□ -2.06
CUP9P41817 VIP1YLR410W 3441 nt2.19□□□□□ -2.06
CUP9P41817 MTL1YGR023W 1656 nt2.19□□□□□ -2.06
CUP9P41817 PCL2YDL127W 927 nt2.19□□□□□ -2.06
CUP9P41817 PEX14YGL153W 1026 nt2.19□□□□□ -2.06
CUP9P41817 YGR204C-AYGR204C-A 114 nt2.19□□□□□ -2.06
CUP9P41817 YIL156W-BYIL156W-B 222 nt2.19□□□□□ -2.06
CUP9P41817 COS1YNL336W 1146 nt2.19□□□□□ -2.06
CUP9P41817 ARA1YBR149W 1035 nt2.19□□□□□ -2.06
CUP9P41817 TPO5YKL174C 1857 nt2.19□□□□□ -2.06
CUP9P41817 APL5YPL195W 2799 nt2.19□□□□□ -2.06
CUP9P41817 SAD1YFR005C 1347 nt2.18□□□□□ -2.06
CUP9P41817 DSS1YMR287C 2910 nt2.18□□□□□ -2.06
CUP9P41817 SAS4YDR181C 1446 nt2.18□□□□□ -2.06
CUP9P41817 HTA1YDR225W 399 nt2.18□□□□□ -2.06
CUP9P41817 HPA3YEL066W 540 nt2.18□□□□□ -2.06
CUP9P41817 SYS1YJL004C 612 nt2.18□□□□□ -2.06
CUP9P41817 YMR187CYMR187C 1296 nt2.18□□□□□ -2.06
CUP9P41817 snR11snR11 258 nt2.18□□□□□ -2.06
CUP9P41817 YOR055WYOR055W 435 nt2.18□□□□□ -2.06
CUP9P41817 YOR062CYOR062C 807 nt2.18□□□□□ -2.06
CUP9P41817 SYC1YOR179C 567 nt2.18□□□□□ -2.06
CUP9P41817 ATG29YPL166W 642 nt2.18□□□□□ -2.06
CUP9P41817 PHO91YNR013C 2685 nt2.18□□□□□ -2.06
CUP9P41817 PLM2YDR501W 1566 nt2.18□□□□□ -2.06
CUP9P41817 MNT3YIL014W 1893 nt2.18□□□□□ -2.06
CUP9P41817 RDS2YPL133C 1341 nt2.17□□□□□ -2.06
CUP9P41817 YCG1YDR325W 3108 nt2.17□□□□□ -2.06
CUP9P41817 YDR239CYDR239C 2364 nt2.17□□□□□ -2.06
CUP9P41817 URK1YNR012W 1506 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms