Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CEACAM3P40198 AC010542.4-201ENST00000563151 1910 ntBASIC17.17■□□□□ 0.34
CEACAM3P40198 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.17■□□□□ 0.34
CEACAM3P40198 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CEACAM3P40198 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM3P40198 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CEACAM3P40198 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.16■□□□□ 0.34
CEACAM3P40198 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.16■□□□□ 0.34
CEACAM3P40198 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.16■□□□□ 0.34
CEACAM3P40198 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 KRT19P1-201ENST00000405746 1186 ntBASIC17.16■□□□□ 0.34
CEACAM3P40198 AC026271.2-201ENST00000428091 497 ntBASIC17.16■□□□□ 0.34
CEACAM3P40198 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.16■□□□□ 0.34
CEACAM3P40198 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.16■□□□□ 0.34
CEACAM3P40198 AC087623.3-201ENST00000607047 1098 ntBASIC17.16■□□□□ 0.34
CEACAM3P40198 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.16■□□□□ 0.34
CEACAM3P40198 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.16■□□□□ 0.34
CEACAM3P40198 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.16■□□□□ 0.34
CEACAM3P40198 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM3P40198 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 AC026471.6-201ENST00000622954 1905 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.15■□□□□ 0.34
CEACAM3P40198 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.15■□□□□ 0.34
CEACAM3P40198 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CEACAM3P40198 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CEACAM3P40198 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CEACAM3P40198 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L2-201ENST00000561772 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.15■□□□□ 0.34
CEACAM3P40198 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L6-201ENST00000626483 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L1-201ENST00000627662 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L8-201ENST00000629013 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L3-201ENST00000630187 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L7-201ENST00000630678 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 DUX4L5-201ENST00000630834 1275 ntBASIC17.15■□□□□ 0.34
CEACAM3P40198 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CEACAM3P40198 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.15■□□□□ 0.34
CEACAM3P40198 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CEACAM3P40198 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CEACAM3P40198 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.14■□□□□ 0.33
CEACAM3P40198 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 EEF1DP3-203ENST00000566025 782 ntBASIC17.14■□□□□ 0.33
CEACAM3P40198 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.14■□□□□ 0.33
CEACAM3P40198 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 AC008175.2-201ENST00000612840 297 ntBASIC17.14■□□□□ 0.33
CEACAM3P40198 AC120498.10-201ENST00000621827 505 ntBASIC17.14■□□□□ 0.33
CEACAM3P40198 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.14■□□□□ 0.33
CEACAM3P40198 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CEACAM3P40198 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CEACAM3P40198 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CEACAM3P40198 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.13■□□□□ 0.33
CEACAM3P40198 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CEACAM3P40198 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CEACAM3P40198 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.13■□□□□ 0.33
CEACAM3P40198 NTF6G-201ENST00000591094 616 ntBASIC17.13■□□□□ 0.33
CEACAM3P40198 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.13■□□□□ 0.33
CEACAM3P40198 AC244015.2-201ENST00000616358 1861 ntBASIC17.13■□□□□ 0.33
CEACAM3P40198 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CEACAM3P40198 FBXW4P1-201ENST00000426721 2239 ntBASIC17.13■□□□□ 0.33
CEACAM3P40198 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms