Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.07■□□□□ 0.96
HMGCLP35914 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HMGCLP35914 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.07■□□□□ 0.96
HMGCLP35914 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HMGCLP35914 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCLP35914 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLP35914 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HMGCLP35914 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGCLP35914 KRT18P5-201ENST00000436075 1291 ntBASIC21.06■□□□□ 0.96
HMGCLP35914 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.06■□□□□ 0.96
HMGCLP35914 AC010141.2-201ENST00000452426 721 ntBASIC21.06■□□□□ 0.96
HMGCLP35914 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLP35914 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.06■□□□□ 0.96
HMGCLP35914 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.06■□□□□ 0.96
HMGCLP35914 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HMGCLP35914 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HMGCLP35914 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HMGCLP35914 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLP35914 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCLP35914 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLP35914 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.05■□□□□ 0.96
HMGCLP35914 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.05■□□□□ 0.96
HMGCLP35914 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLP35914 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HMGCLP35914 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLP35914 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HMGCLP35914 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.05■□□□□ 0.96
HMGCLP35914 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCLP35914 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HMGCLP35914 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.04■□□□□ 0.96
HMGCLP35914 AL162430.1-201ENST00000480705 870 ntBASIC21.04■□□□□ 0.96
HMGCLP35914 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCLP35914 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.04■□□□□ 0.96
HMGCLP35914 AC008175.2-201ENST00000612840 297 ntBASIC21.04■□□□□ 0.96
HMGCLP35914 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.04■□□□□ 0.96
HMGCLP35914 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HMGCLP35914 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HMGCLP35914 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HMGCLP35914 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.03■□□□□ 0.96
HMGCLP35914 POU5F1P4-201ENST00000413175 1085 ntBASIC21.03■□□□□ 0.96
HMGCLP35914 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 AP001160.3-201ENST00000601484 763 ntBASIC21.03■□□□□ 0.96
HMGCLP35914 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HMGCLP35914 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.03■□□□□ 0.96
HMGCLP35914 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
HMGCLP35914 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HMGCLP35914 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCLP35914 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HMGCLP35914 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.02■□□□□ 0.96
HMGCLP35914 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.02■□□□□ 0.96
HMGCLP35914 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCLP35914 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
HMGCLP35914 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCLP35914 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.01■□□□□ 0.95
HMGCLP35914 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HMGCLP35914 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.01■□□□□ 0.95
HMGCLP35914 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.01■□□□□ 0.95
HMGCLP35914 KRT18P20-201ENST00000548986 1279 ntBASIC21.01■□□□□ 0.95
HMGCLP35914 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
HMGCLP35914 AC061975.6-201ENST00000579045 1553 ntBASIC21.01■□□□□ 0.95
HMGCLP35914 AC026310.3-201ENST00000625186 2373 ntBASIC21.01■□□□□ 0.95
HMGCLP35914 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.01■□□□□ 0.95
HMGCLP35914 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCLP35914 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCLP35914 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HMGCLP35914 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms