Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 CHS1YNL192W 3396 nt2.67□□□□□ -1.98
UFD4P33202 SKT5YBL061C 2091 nt2.67□□□□□ -1.98
UFD4P33202 SHE4YOR035C 2370 nt2.66□□□□□ -1.98
UFD4P33202 ARL1YBR164C 552 nt2.66□□□□□ -1.98
UFD4P33202 YOR365CYOR365C 2112 nt2.66□□□□□ -1.98
UFD4P33202 RTP1YMR185W 2946 nt2.66□□□□□ -1.98
UFD4P33202 YDR239CYDR239C 2364 nt2.66□□□□□ -1.98
UFD4P33202 ETP1YHL010C 1758 nt2.66□□□□□ -1.98
UFD4P33202 SEC28YIL076W 891 nt2.65□□□□□ -1.98
UFD4P33202 CDC123YLR215C 1083 nt2.65□□□□□ -1.98
UFD4P33202 VMA9YCL005W-A 222 nt2.65□□□□□ -1.98
UFD4P33202 MCD1YDL003W 1701 nt2.65□□□□□ -1.98
UFD4P33202 PEX10YDR265W 1014 nt2.65□□□□□ -1.99
UFD4P33202 PMT4YJR143C 2289 nt2.65□□□□□ -1.99
UFD4P33202 GCD7YLR291C 1146 nt2.65□□□□□ -1.99
UFD4P33202 SPS18YNL204C 903 nt2.65□□□□□ -1.99
UFD4P33202 MDM20YOL076W 2391 nt2.65□□□□□ -1.99
UFD4P33202 IDH2YOR136W 1110 nt2.65□□□□□ -1.99
UFD4P33202 SWD3YBR175W 948 nt2.65□□□□□ -1.99
UFD4P33202 CDC60YPL160W 3273 nt2.64□□□□□ -1.99
UFD4P33202 GPP2YER062C 753 nt2.64□□□□□ -1.99
UFD4P33202 CYC1YJR048W 330 nt2.64□□□□□ -1.99
UFD4P33202 YMR306C-AYMR306C-A 390 nt2.64□□□□□ -1.99
UFD4P33202 CDC31YOR257W 486 nt2.64□□□□□ -1.99
UFD4P33202 HEM4YOR278W 828 nt2.64□□□□□ -1.99
UFD4P33202 CAB2YIL083C 1098 nt2.63□□□□□ -1.99
UFD4P33202 REH1YLR387C 1299 nt2.63□□□□□ -1.99
UFD4P33202 SSN8YNL025C 972 nt2.63□□□□□ -1.99
UFD4P33202 PRT1YOR361C 2292 nt2.62□□□□□ -1.99
UFD4P33202 BUD6YLR319C 2367 nt2.62□□□□□ -1.99
UFD4P33202 YGR130CYGR130C 2451 nt2.61□□□□□ -1.99
UFD4P33202 PSK1YAL017W 4071 nt2.61□□□□□ -1.99
UFD4P33202 YML090WYML090W 387 nt2.61□□□□□ -1.99
UFD4P33202 RGA1YOR127W 3024 nt2.61□□□□□ -1.99
UFD4P33202 FRE2YKL220C 2136 nt2.6□□□□□ -1.99
UFD4P33202 TTI1YKL033W 3117 nt2.6□□□□□ -1.99
UFD4P33202 DID4YKL002W 699 nt2.6□□□□□ -1.99
UFD4P33202 SET6YPL165C 1122 nt2.6□□□□□ -1.99
UFD4P33202 YAR1YPL239W 603 nt2.6□□□□□ -1.99
UFD4P33202 APL2YKL135C 2181 nt2.6□□□□□ -1.99
UFD4P33202 GEA1YJR031C 4227 nt2.6□□□□□ -1.99
UFD4P33202 BCS1YDR375C 1371 nt2.6□□□□□ -1.99
UFD4P33202 SRS2YJL092W 3525 nt2.59□□□□□ -2
UFD4P33202 PHO13YDL236W 939 nt2.58□□□□□ -2
UFD4P33202 MRPS17YMR188C 714 nt2.58□□□□□ -2
UFD4P33202 MPP6YNR024W 561 nt2.58□□□□□ -2
UFD4P33202 LRE1YCL051W 1752 nt2.58□□□□□ -2
UFD4P33202 MSH6YDR097C 3729 nt2.58□□□□□ -2
UFD4P33202 ECM5YMR176W 4236 nt2.58□□□□□ -2
UFD4P33202 UTP14YML093W 2700 nt2.58□□□□□ -2
UFD4P33202 MET6YER091C 2304 nt2.58□□□□□ -2
UFD4P33202 KRE2YDR483W 1329 nt2.58□□□□□ -2
UFD4P33202 SLX9YGR081C 633 nt2.58□□□□□ -2
UFD4P33202 YJU2YKL095W 837 nt2.58□□□□□ -2
UFD4P33202 RUF21RUF21 707 nt2.58□□□□□ -2
UFD4P33202 YNL144CYNL144C 2223 nt2.57□□□□□ -2
UFD4P33202 IRC10YOL015W 1761 nt2.57□□□□□ -2
UFD4P33202 YOS1YER074W-A 258 nt2.57□□□□□ -2
UFD4P33202 IRR1YIL026C 3453 nt2.57□□□□□ -2
UFD4P33202 CPA2YJR109C 3357 nt2.56□□□□□ -2
UFD4P33202 BNI1YNL271C 5862 nt2.56□□□□□ -2
UFD4P33202 MGT1YDL200C 567 nt2.56□□□□□ -2
UFD4P33202 COS4YFL062W 1140 nt2.56□□□□□ -2
UFD4P33202 YLR428CYLR428C 345 nt2.56□□□□□ -2
UFD4P33202 SKI3YPR189W 4299 nt2.55□□□□□ -2
UFD4P33202 YBT1YLL048C 4986 nt2.55□□□□□ -2
UFD4P33202 CBS2YDR197W 1170 nt2.55□□□□□ -2
UFD4P33202 RTT102YGR275W 474 nt2.55□□□□□ -2
UFD4P33202 ENV10YLR065C 546 nt2.55□□□□□ -2
UFD4P33202 MGA2YIR033W 3342 nt2.55□□□□□ -2
UFD4P33202 DNF3YMR162C 4971 nt2.54□□□□□ -2
UFD4P33202 PAU2YEL049W 363 nt2.54□□□□□ -2
UFD4P33202 PAU12YGR294W 363 nt2.54□□□□□ -2
UFD4P33202 PAU18YLL064C 363 nt2.54□□□□□ -2
UFD4P33202 PDP3YLR455W 915 nt2.54□□□□□ -2
UFD4P33202 OST6YML019W 999 nt2.54□□□□□ -2
UFD4P33202 PAU6YNR076W 363 nt2.54□□□□□ -2
UFD4P33202 YOR034C-AYOR034C-A 243 nt2.54□□□□□ -2
UFD4P33202 HMT1YBR034C 1047 nt2.54□□□□□ -2
UFD4P33202 PAU24YBR301W 363 nt2.54□□□□□ -2
UFD4P33202 YBL005W-BYBL005W-B 5268 nt2.54□□□□□ -2
UFD4P33202 PAC1YOR269W 1485 nt2.54□□□□□ -2
UFD4P33202 PFA5YDR459C 1125 nt2.53□□□□□ -2
UFD4P33202 YLR462WYLR462W 609 nt2.53□□□□□ -2
UFD4P33202 SNU114YKL173W 3027 nt2.53□□□□□ -2
UFD4P33202 VPS16YPL045W 2397 nt2.53□□□□□ -2
UFD4P33202 TMA64YDR117C 1698 nt2.53□□□□□ -2
UFD4P33202 ART10YLR392C 1557 nt2.53□□□□□ -2.01
UFD4P33202 HMO1YDR174W 741 nt2.52□□□□□ -2.01
UFD4P33202 ORM1YGR038W 669 nt2.52□□□□□ -2.01
UFD4P33202 REC114YMR133W 1287 nt2.52□□□□□ -2.01
UFD4P33202 SIL1YOL031C 1266 nt2.52□□□□□ -2.01
UFD4P33202 snR37snR37 386 nt2.52□□□□□ -2.01
UFD4P33202 UBP12YJL197W 3765 nt2.52□□□□□ -2.01
UFD4P33202 IRA1YBR140C 9279 nt2.52□□□□□ -2.01
UFD4P33202 NAT1YDL040C 2565 nt2.52□□□□□ -2.01
UFD4P33202 SNM1YDR478W 597 nt2.52□□□□□ -2.01
UFD4P33202 YVH1YIR026C 1095 nt2.52□□□□□ -2.01
UFD4P33202 NSE1YLR007W 1011 nt2.52□□□□□ -2.01
UFD4P33202 RMP1YLR145W 606 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms