Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC233263.1-201ENST00000578059 224 ntBASIC30.18■■■□□ 2.42
CPS1P31327 AC053503.5-201ENST00000601508 636 ntBASIC30.18■■■□□ 2.42
CPS1P31327 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CPS1P31327 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CPS1P31327 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC30.18■■■□□ 2.42
CPS1P31327 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CPS1P31327 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CPS1P31327 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CPS1P31327 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CPS1P31327 KRT17P3-201ENST00000420566 1262 ntBASIC30.17■■■□□ 2.42
CPS1P31327 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CPS1P31327 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.17■■■□□ 2.42
CPS1P31327 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC30.17■■■□□ 2.42
CPS1P31327 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CPS1P31327 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.17■■■□□ 2.42
CPS1P31327 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
CPS1P31327 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC30.17■■■□□ 2.42
CPS1P31327 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CPS1P31327 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
CPS1P31327 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CPS1P31327 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CPS1P31327 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CPS1P31327 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.16■■■□□ 2.42
CPS1P31327 DHDH-203ENST00000522614 776 ntTSL 5 BASIC30.16■■■□□ 2.42
CPS1P31327 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.16■■■□□ 2.42
CPS1P31327 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.15■■■□□ 2.42
CPS1P31327 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.15■■■□□ 2.42
CPS1P31327 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.15■■■□□ 2.42
CPS1P31327 LSM12P1-201ENST00000411836 588 ntBASIC30.15■■■□□ 2.42
CPS1P31327 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 TSPY7P-201ENST00000431358 1114 ntBASIC30.15■■■□□ 2.42
CPS1P31327 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.15■■■□□ 2.42
CPS1P31327 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CPS1P31327 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CPS1P31327 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CPS1P31327 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.14■■■□□ 2.42
CPS1P31327 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.14■■■□□ 2.42
CPS1P31327 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC30.14■■■□□ 2.42
CPS1P31327 AL591742.1-201ENST00000604433 565 ntBASIC30.14■■■□□ 2.42
CPS1P31327 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CPS1P31327 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC30.14■■■□□ 2.42
CPS1P31327 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC30.14■■■□□ 2.42
CPS1P31327 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.41
CPS1P31327 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CPS1P31327 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
CPS1P31327 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CPS1P31327 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
CPS1P31327 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.13■■■□□ 2.41
CPS1P31327 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.13■■■□□ 2.41
CPS1P31327 LINC00526-201ENST00000581067 1875 ntBASIC30.13■■■□□ 2.41
CPS1P31327 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CPS1P31327 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
CPS1P31327 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
CPS1P31327 KRT17P2-201ENST00000300992 1314 ntBASIC30.13■■■□□ 2.41
CPS1P31327 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CPS1P31327 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
CPS1P31327 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
CPS1P31327 PNMA6B-201ENST00000538162 1200 ntBASIC30.12■■■□□ 2.41
CPS1P31327 REXO2-216ENST00000544196 452 ntTSL 3 BASIC30.12■■■□□ 2.41
CPS1P31327 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CPS1P31327 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.12■■■□□ 2.41
CPS1P31327 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.12■■■□□ 2.41
CPS1P31327 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC30.12■■■□□ 2.41
CPS1P31327 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CPS1P31327 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CPS1P31327 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.12■■■□□ 2.41
CPS1P31327 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CPS1P31327 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.12■■■□□ 2.41
CPS1P31327 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CPS1P31327 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CPS1P31327 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPS1P31327 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPS1P31327 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPS1P31327 RBM17P2-201ENST00000616397 1405 ntBASIC30.11■■■□□ 2.41
CPS1P31327 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.11■■■□□ 2.41
CPS1P31327 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CPS1P31327 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC30.11■■■□□ 2.41
CPS1P31327 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CPS1P31327 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CPS1P31327 RPS2P55-201ENST00000397318 883 ntBASIC30.1■■■□□ 2.41
CPS1P31327 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CPS1P31327 PBX1-209ENST00000485769 834 ntTSL 2 BASIC30.1■■■□□ 2.41
CPS1P31327 AC107956.1-201ENST00000494359 873 ntBASIC30.1■■■□□ 2.41
CPS1P31327 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC30.1■■■□□ 2.41
CPS1P31327 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.1■■■□□ 2.41
CPS1P31327 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.1■■■□□ 2.41
CPS1P31327 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.1■■■□□ 2.41
CPS1P31327 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CPS1P31327 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC30.1■■■□□ 2.41
CPS1P31327 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CPS1P31327 OR7E47P-201ENST00000546390 1422 ntBASIC30.09■■■□□ 2.41
CPS1P31327 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CPS1P31327 TMPOP1-202ENST00000424642 1267 ntBASIC30.09■■■□□ 2.41
CPS1P31327 CD177P1-201ENST00000606252 935 ntBASIC30.09■■■□□ 2.41
CPS1P31327 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms