Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC12P31275 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HOXC12P31275 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC12P31275 CD99P1-205ENST00000527459 561 ntBASIC18.66■□□□□ 0.58
HOXC12P31275 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC12P31275 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC12P31275 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXC12P31275 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC12P31275 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HOXC12P31275 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC12P31275 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC12P31275 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXC12P31275 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC12P31275 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC12P31275 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
HOXC12P31275 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC12P31275 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC12P31275 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HOXC12P31275 GPX1P1-201ENST00000388829 606 ntBASIC18.64■□□□□ 0.57
HOXC12P31275 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
HOXC12P31275 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC12P31275 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC12P31275 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC12P31275 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC12P31275 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HOXC12P31275 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC12P31275 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC12P31275 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
HOXC12P31275 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC12P31275 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXC12P31275 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXC12P31275 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC12P31275 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC12P31275 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
HOXC12P31275 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.62■□□□□ 0.57
HOXC12P31275 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC12P31275 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
HOXC12P31275 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC12P31275 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HOXC12P31275 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC12P31275 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 AC012676.1-201ENST00000574705 1949 ntBASIC18.61■□□□□ 0.57
HOXC12P31275 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 KRT18P11-201ENST00000435214 1283 ntBASIC18.61■□□□□ 0.57
HOXC12P31275 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC12P31275 AC104187.1-201ENST00000607510 612 ntBASIC18.61■□□□□ 0.57
HOXC12P31275 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.61■□□□□ 0.57
HOXC12P31275 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC12P31275 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC12P31275 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC12P31275 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms