Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNF165-205ENST00000588679 2904 ntBASIC20.48■□□□□ 0.87
EPHA3P29320 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EPHA3P29320 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHA3P29320 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA3P29320 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA3P29320 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EPHA3P29320 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHA3P29320 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHA3P29320 AL356740.2-201ENST00000601559 647 ntBASIC20.48■□□□□ 0.87
EPHA3P29320 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.48■□□□□ 0.87
EPHA3P29320 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA3P29320 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHA3P29320 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHA3P29320 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.47■□□□□ 0.87
EPHA3P29320 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
EPHA3P29320 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
EPHA3P29320 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EPHA3P29320 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
EPHA3P29320 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
EPHA3P29320 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EPHA3P29320 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA3P29320 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
EPHA3P29320 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.46■□□□□ 0.87
EPHA3P29320 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
EPHA3P29320 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHA3P29320 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
EPHA3P29320 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
EPHA3P29320 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA3P29320 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.87
EPHA3P29320 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
EPHA3P29320 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA3P29320 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA3P29320 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA3P29320 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA3P29320 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.45■□□□□ 0.86
EPHA3P29320 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA3P29320 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA3P29320 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
EPHA3P29320 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA3P29320 AC073314.1-201ENST00000568729 2216 ntBASIC20.45■□□□□ 0.86
EPHA3P29320 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA3P29320 AC006128.1-201ENST00000624704 1661 ntBASIC20.45■□□□□ 0.86
EPHA3P29320 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA3P29320 PLK5-205ENST00000642079 1969 ntBASIC20.45■□□□□ 0.86
EPHA3P29320 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 SRD5A1P1-201ENST00000442297 786 ntBASIC20.44■□□□□ 0.86
EPHA3P29320 MIR3621-201ENST00000580529 85 ntBASIC20.44■□□□□ 0.86
EPHA3P29320 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.44■□□□□ 0.86
EPHA3P29320 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA3P29320 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.44■□□□□ 0.86
EPHA3P29320 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
EPHA3P29320 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EPHA3P29320 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
EPHA3P29320 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 AP005212.1-201ENST00000581547 1997 ntBASIC20.43■□□□□ 0.86
EPHA3P29320 AL391422.3-201ENST00000603791 2761 ntBASIC20.43■□□□□ 0.86
EPHA3P29320 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHA3P29320 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
EPHA3P29320 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
EPHA3P29320 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA3P29320 AP006587.3-201ENST00000525742 1516 ntBASIC20.43■□□□□ 0.86
EPHA3P29320 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA3P29320 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.42■□□□□ 0.86
EPHA3P29320 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms