Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCKDHBP21953 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCKDHBP21953 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCKDHBP21953 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BCKDHBP21953 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
BCKDHBP21953 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.97■□□□□ 0.95
BCKDHBP21953 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.97■□□□□ 0.95
BCKDHBP21953 AL355472.2-201ENST00000422958 438 ntBASIC20.97■□□□□ 0.95
BCKDHBP21953 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BCKDHBP21953 KRT17P1-201ENST00000399211 1546 ntBASIC20.97■□□□□ 0.95
BCKDHBP21953 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCKDHBP21953 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCKDHBP21953 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCKDHBP21953 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.97■□□□□ 0.95
BCKDHBP21953 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.96■□□□□ 0.95
BCKDHBP21953 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
BCKDHBP21953 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BCKDHBP21953 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BCKDHBP21953 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.96■□□□□ 0.95
BCKDHBP21953 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.96■□□□□ 0.95
BCKDHBP21953 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.96■□□□□ 0.95
BCKDHBP21953 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.96■□□□□ 0.95
BCKDHBP21953 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.96■□□□□ 0.95
BCKDHBP21953 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCKDHBP21953 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
BCKDHBP21953 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
BCKDHBP21953 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
BCKDHBP21953 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.95■□□□□ 0.94
BCKDHBP21953 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.95■□□□□ 0.94
BCKDHBP21953 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BCKDHBP21953 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BCKDHBP21953 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 AC139530.1-201ENST00000575312 1977 ntBASIC20.94■□□□□ 0.94
BCKDHBP21953 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
BCKDHBP21953 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.94■□□□□ 0.94
BCKDHBP21953 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
BCKDHBP21953 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.94■□□□□ 0.94
BCKDHBP21953 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.94■□□□□ 0.94
BCKDHBP21953 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.94■□□□□ 0.94
BCKDHBP21953 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
BCKDHBP21953 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BCKDHBP21953 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
BCKDHBP21953 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
BCKDHBP21953 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.93■□□□□ 0.94
BCKDHBP21953 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCKDHBP21953 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BCKDHBP21953 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCKDHBP21953 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.93■□□□□ 0.94
BCKDHBP21953 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.93■□□□□ 0.94
BCKDHBP21953 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.93■□□□□ 0.94
BCKDHBP21953 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.93■□□□□ 0.94
BCKDHBP21953 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BCKDHBP21953 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BCKDHBP21953 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BCKDHBP21953 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
BCKDHBP21953 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.92■□□□□ 0.94
BCKDHBP21953 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BCKDHBP21953 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.92■□□□□ 0.94
BCKDHBP21953 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.92■□□□□ 0.94
BCKDHBP21953 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
BCKDHBP21953 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BCKDHBP21953 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BCKDHBP21953 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.91■□□□□ 0.94
BCKDHBP21953 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms