Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.33■□□□□ 0.84
LBPP18428 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LBPP18428 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LBPP18428 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.32■□□□□ 0.84
LBPP18428 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
LBPP18428 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.32■□□□□ 0.84
LBPP18428 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LBPP18428 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.32■□□□□ 0.84
LBPP18428 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.32■□□□□ 0.84
LBPP18428 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.32■□□□□ 0.84
LBPP18428 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
LBPP18428 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.32■□□□□ 0.84
LBPP18428 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LBPP18428 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
LBPP18428 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.31■□□□□ 0.84
LBPP18428 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
LBPP18428 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LBPP18428 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.31■□□□□ 0.84
LBPP18428 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.31■□□□□ 0.84
LBPP18428 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.31■□□□□ 0.84
LBPP18428 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LBPP18428 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LBPP18428 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LBPP18428 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
LBPP18428 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.3■□□□□ 0.84
LBPP18428 MIR4466-201ENST00000606121 54 ntBASIC20.3■□□□□ 0.84
LBPP18428 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
LBPP18428 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LBPP18428 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.29■□□□□ 0.84
LBPP18428 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LBPP18428 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.29■□□□□ 0.84
LBPP18428 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.29■□□□□ 0.84
LBPP18428 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
LBPP18428 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.29■□□□□ 0.84
LBPP18428 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LBPP18428 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LBPP18428 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
LBPP18428 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LBPP18428 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
LBPP18428 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.28■□□□□ 0.84
LBPP18428 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LBPP18428 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LBPP18428 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.28■□□□□ 0.84
LBPP18428 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.28■□□□□ 0.84
LBPP18428 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.28■□□□□ 0.84
LBPP18428 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.28■□□□□ 0.84
LBPP18428 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LBPP18428 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
LBPP18428 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.28■□□□□ 0.84
LBPP18428 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LBPP18428 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LBPP18428 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
LBPP18428 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.27■□□□□ 0.84
LBPP18428 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBPP18428 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LBPP18428 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms