Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.88■□□□□ 0.77
NCK1P16333 AC010525.1-201ENST00000585559 441 ntBASIC19.88■□□□□ 0.77
NCK1P16333 AC087239.1-201ENST00000622671 572 ntBASIC19.88■□□□□ 0.77
NCK1P16333 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.88■□□□□ 0.77
NCK1P16333 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NCK1P16333 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NCK1P16333 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NCK1P16333 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
NCK1P16333 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NCK1P16333 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NCK1P16333 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCK1P16333 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCK1P16333 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NCK1P16333 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.87■□□□□ 0.77
NCK1P16333 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
NCK1P16333 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NCK1P16333 MIR3181-201ENST00000578512 73 ntBASIC19.87■□□□□ 0.77
NCK1P16333 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCK1P16333 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NCK1P16333 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.87■□□□□ 0.77
NCK1P16333 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NCK1P16333 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NCK1P16333 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NCK1P16333 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NCK1P16333 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NCK1P16333 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
NCK1P16333 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.86■□□□□ 0.77
NCK1P16333 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.86■□□□□ 0.77
NCK1P16333 OR2I1P-207ENST00000453522 948 ntBASIC19.86■□□□□ 0.77
NCK1P16333 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.86■□□□□ 0.77
NCK1P16333 UNC93B8-201ENST00000511903 705 ntBASIC19.86■□□□□ 0.77
NCK1P16333 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.86■□□□□ 0.77
NCK1P16333 AP004607.7-201ENST00000527152 1677 ntBASIC19.86■□□□□ 0.77
NCK1P16333 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.86■□□□□ 0.77
NCK1P16333 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 PLK5-205ENST00000642079 1969 ntBASIC19.86■□□□□ 0.77
NCK1P16333 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NCK1P16333 GABARAPL3-202ENST00000624044 1851 ntBASIC19.86■□□□□ 0.77
NCK1P16333 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NCK1P16333 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
NCK1P16333 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
NCK1P16333 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NCK1P16333 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.85■□□□□ 0.77
NCK1P16333 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 AC006128.1-201ENST00000624704 1661 ntBASIC19.85■□□□□ 0.77
NCK1P16333 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.85■□□□□ 0.77
NCK1P16333 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.85■□□□□ 0.77
NCK1P16333 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
NCK1P16333 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NCK1P16333 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
NCK1P16333 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.84■□□□□ 0.77
NCK1P16333 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.84■□□□□ 0.77
NCK1P16333 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NCK1P16333 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.83■□□□□ 0.77
NCK1P16333 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NCK1P16333 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.83■□□□□ 0.77
NCK1P16333 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.83■□□□□ 0.77
NCK1P16333 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NCK1P16333 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NCK1P16333 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.83■□□□□ 0.77
NCK1P16333 AC007952.6-201ENST00000573168 2673 ntBASIC19.83■□□□□ 0.76
NCK1P16333 AC003957.1-201ENST00000625108 2673 ntBASIC19.83■□□□□ 0.76
NCK1P16333 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NCK1P16333 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.83■□□□□ 0.76
NCK1P16333 AFG3L1P-217ENST00000557444 2447 ntBASIC19.83■□□□□ 0.76
NCK1P16333 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms