Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PF4V1P10720 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
PF4V1P10720 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PF4V1P10720 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PF4V1P10720 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PF4V1P10720 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PF4V1P10720 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.67■□□□□ 0.26
PF4V1P10720 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 AC055733.4-201ENST00000638462 1354 ntBASIC16.67■□□□□ 0.26
PF4V1P10720 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.67■□□□□ 0.26
PF4V1P10720 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.67■□□□□ 0.26
PF4V1P10720 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PF4V1P10720 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.67■□□□□ 0.26
PF4V1P10720 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.67■□□□□ 0.26
PF4V1P10720 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.67■□□□□ 0.26
PF4V1P10720 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.67■□□□□ 0.26
PF4V1P10720 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.67■□□□□ 0.26
PF4V1P10720 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.67■□□□□ 0.26
PF4V1P10720 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 KRT87P-202ENST00000534226 1464 ntBASIC16.67■□□□□ 0.26
PF4V1P10720 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PF4V1P10720 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.66■□□□□ 0.26
PF4V1P10720 FAM99A-202ENST00000538190 1989 ntBASIC16.66■□□□□ 0.26
PF4V1P10720 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.66■□□□□ 0.26
PF4V1P10720 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.66■□□□□ 0.26
PF4V1P10720 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.66■□□□□ 0.26
PF4V1P10720 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
PF4V1P10720 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PF4V1P10720 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PF4V1P10720 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PF4V1P10720 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.65■□□□□ 0.26
PF4V1P10720 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PF4V1P10720 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.65■□□□□ 0.26
PF4V1P10720 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.65■□□□□ 0.26
PF4V1P10720 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.65■□□□□ 0.26
PF4V1P10720 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PF4V1P10720 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.65■□□□□ 0.26
PF4V1P10720 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PF4V1P10720 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PF4V1P10720 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.64■□□□□ 0.26
PF4V1P10720 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.64■□□□□ 0.25
PF4V1P10720 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.64■□□□□ 0.25
PF4V1P10720 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 CDCA4P2-201ENST00000441182 718 ntBASIC16.64■□□□□ 0.25
PF4V1P10720 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PF4V1P10720 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PF4V1P10720 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.64■□□□□ 0.25
PF4V1P10720 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.64■□□□□ 0.25
PF4V1P10720 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.64■□□□□ 0.25
PF4V1P10720 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.64■□□□□ 0.25
PF4V1P10720 AC011767.1-201ENST00000617410 1153 ntBASIC16.64■□□□□ 0.25
PF4V1P10720 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.64■□□□□ 0.25
PF4V1P10720 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.64■□□□□ 0.25
PF4V1P10720 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PF4V1P10720 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PF4V1P10720 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.64■□□□□ 0.25
PF4V1P10720 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.63■□□□□ 0.25
PF4V1P10720 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PF4V1P10720 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms