Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINGO3P0C6S8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
LINGO3P0C6S8 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
LINGO3P0C6S8 AC245100.8-202ENST00000629247 1058 ntBASIC20.28■□□□□ 0.84
LINGO3P0C6S8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
LINGO3P0C6S8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 AL136116.3-201ENST00000402907 1138 ntBASIC20.27■□□□□ 0.84
LINGO3P0C6S8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 AC009086.3-201ENST00000623486 1008 ntBASIC20.27■□□□□ 0.84
LINGO3P0C6S8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINGO3P0C6S8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINGO3P0C6S8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.26■□□□□ 0.83
LINGO3P0C6S8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINGO3P0C6S8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 AC008406.3-201ENST00000620001 1374 ntBASIC20.25■□□□□ 0.83
LINGO3P0C6S8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
LINGO3P0C6S8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINGO3P0C6S8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 Z98882.1-201ENST00000622160 2253 ntBASIC20.24■□□□□ 0.83
LINGO3P0C6S8 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
LINGO3P0C6S8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINGO3P0C6S8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 AC018445.3-201ENST00000624177 1945 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms