Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TPM3P06753 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TPM3P06753 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TPM3P06753 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
TPM3P06753 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TPM3P06753 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.57■■□□□ 1.36
TPM3P06753 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
TPM3P06753 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TPM3P06753 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
TPM3P06753 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TPM3P06753 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
TPM3P06753 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.56■■□□□ 1.36
TPM3P06753 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.56■■□□□ 1.36
TPM3P06753 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.56■■□□□ 1.36
TPM3P06753 MIR4787-201ENST00000607364 84 ntBASIC23.56■■□□□ 1.36
TPM3P06753 AC068587.7-201ENST00000641602 218 ntBASIC23.56■■□□□ 1.36
TPM3P06753 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM3P06753 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TPM3P06753 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TPM3P06753 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM3P06753 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM3P06753 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.56■■□□□ 1.36
TPM3P06753 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TPM3P06753 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.56■■□□□ 1.36
TPM3P06753 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.55■■□□□ 1.36
TPM3P06753 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
TPM3P06753 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TPM3P06753 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.55■■□□□ 1.36
TPM3P06753 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.55■■□□□ 1.36
TPM3P06753 AL117332.1-201ENST00000622628 974 ntBASIC23.55■■□□□ 1.36
TPM3P06753 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TPM3P06753 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.55■■□□□ 1.36
TPM3P06753 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.55■■□□□ 1.36
TPM3P06753 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TPM3P06753 AP005212.1-201ENST00000581547 1997 ntBASIC23.54■■□□□ 1.36
TPM3P06753 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.54■■□□□ 1.36
TPM3P06753 AC133637.1-201ENST00000624115 1537 ntBASIC23.54■■□□□ 1.36
TPM3P06753 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM3P06753 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TPM3P06753 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.54■■□□□ 1.36
TPM3P06753 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM3P06753 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TPM3P06753 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM3P06753 AC026471.6-201ENST00000622954 1905 ntBASIC23.54■■□□□ 1.36
TPM3P06753 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TPM3P06753 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.54■■□□□ 1.36
TPM3P06753 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.53■■□□□ 1.36
TPM3P06753 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.53■■□□□ 1.36
TPM3P06753 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
TPM3P06753 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
TPM3P06753 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TPM3P06753 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.53■■□□□ 1.36
TPM3P06753 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.52■■□□□ 1.36
TPM3P06753 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TPM3P06753 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.52■■□□□ 1.36
TPM3P06753 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TPM3P06753 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TPM3P06753 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
TPM3P06753 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TPM3P06753 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TPM3P06753 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
TPM3P06753 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TPM3P06753 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM3P06753 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TPM3P06753 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.51■■□□□ 1.35
TPM3P06753 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.51■■□□□ 1.35
TPM3P06753 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TPM3P06753 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TPM3P06753 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.51■■□□□ 1.35
TPM3P06753 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.51■■□□□ 1.35
TPM3P06753 AC087239.1-201ENST00000622671 572 ntBASIC23.51■■□□□ 1.35
TPM3P06753 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms