Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.42■■□□□ 1.18
ATP1A1P05023 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.42■■□□□ 1.18
ATP1A1P05023 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
ATP1A1P05023 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ATP1A1P05023 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 AP005212.1-201ENST00000581547 1997 ntBASIC22.41■■□□□ 1.18
ATP1A1P05023 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP1A1P05023 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ATP1A1P05023 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.41■■□□□ 1.18
ATP1A1P05023 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
ATP1A1P05023 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
ATP1A1P05023 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
ATP1A1P05023 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
ATP1A1P05023 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.4■■□□□ 1.18
ATP1A1P05023 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.4■■□□□ 1.18
ATP1A1P05023 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
ATP1A1P05023 GABARAPL3-202ENST00000624044 1851 ntBASIC22.4■■□□□ 1.18
ATP1A1P05023 AL391422.3-201ENST00000603791 2761 ntBASIC22.4■■□□□ 1.18
ATP1A1P05023 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ATP1A1P05023 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP1A1P05023 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ATP1A1P05023 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.39■■□□□ 1.18
ATP1A1P05023 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ATP1A1P05023 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
ATP1A1P05023 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 AC068587.7-201ENST00000641602 218 ntBASIC22.39■■□□□ 1.17
ATP1A1P05023 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP1A1P05023 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
ATP1A1P05023 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP1A1P05023 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
ATP1A1P05023 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP1A1P05023 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
ATP1A1P05023 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.39■■□□□ 1.17
ATP1A1P05023 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.38■■□□□ 1.17
ATP1A1P05023 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.38■■□□□ 1.17
ATP1A1P05023 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP1A1P05023 SRD5A1P1-201ENST00000442297 786 ntBASIC22.38■■□□□ 1.17
ATP1A1P05023 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.38■■□□□ 1.17
ATP1A1P05023 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ATP1A1P05023 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP1A1P05023 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ATP1A1P05023 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP1A1P05023 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ATP1A1P05023 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP1A1P05023 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP1A1P05023 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
ATP1A1P05023 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
ATP1A1P05023 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP1A1P05023 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP1A1P05023 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP1A1P05023 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP1A1P05023 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP1A1P05023 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP1A1P05023 AC007952.6-201ENST00000573168 2673 ntBASIC22.36■■□□□ 1.17
ATP1A1P05023 AC003957.1-201ENST00000625108 2673 ntBASIC22.36■■□□□ 1.17
ATP1A1P05023 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP1A1P05023 PLK5-205ENST00000642079 1969 ntBASIC22.36■■□□□ 1.17
ATP1A1P05023 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
ATP1A1P05023 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 AC006128.1-201ENST00000624704 1661 ntBASIC22.36■■□□□ 1.17
ATP1A1P05023 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP1A1P05023 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP1A1P05023 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
ATP1A1P05023 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP1A1P05023 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ATP1A1P05023 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
ATP1A1P05023 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
ATP1A1P05023 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 OR2I1P-207ENST00000453522 948 ntBASIC22.35■■□□□ 1.17
ATP1A1P05023 AC010141.3-201ENST00000456659 717 ntBASIC22.35■■□□□ 1.17
ATP1A1P05023 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP1A1P05023 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP1A1P05023 PCDHAC2-203ENST00000615316 3011 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms