Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
LCATP04180 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LCATP04180 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.41■□□□□ 0.54
LCATP04180 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.4■□□□□ 0.54
LCATP04180 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.4■□□□□ 0.54
LCATP04180 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 IRS3P-201ENST00000223076 1006 ntBASIC18.4■□□□□ 0.54
LCATP04180 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.4■□□□□ 0.54
LCATP04180 AL358852.1-201ENST00000623174 1268 ntBASIC18.4■□□□□ 0.54
LCATP04180 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.4■□□□□ 0.54
LCATP04180 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.4■□□□□ 0.54
LCATP04180 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LCATP04180 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.39■□□□□ 0.54
LCATP04180 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.39■□□□□ 0.53
LCATP04180 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LCATP04180 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.39■□□□□ 0.53
LCATP04180 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.39■□□□□ 0.53
LCATP04180 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.39■□□□□ 0.53
LCATP04180 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 AC055733.4-201ENST00000638462 1354 ntBASIC18.39■□□□□ 0.53
LCATP04180 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LCATP04180 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCATP04180 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LCATP04180 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LCATP04180 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LCATP04180 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.38■□□□□ 0.53
LCATP04180 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.38■□□□□ 0.53
LCATP04180 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.38■□□□□ 0.53
LCATP04180 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.38■□□□□ 0.53
LCATP04180 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LCATP04180 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCATP04180 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.37■□□□□ 0.53
LCATP04180 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.37■□□□□ 0.53
LCATP04180 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LCATP04180 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.37■□□□□ 0.53
LCATP04180 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.37■□□□□ 0.53
LCATP04180 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.37■□□□□ 0.53
LCATP04180 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.37■□□□□ 0.53
LCATP04180 MIR6084-201ENST00000622012 110 ntBASIC18.37■□□□□ 0.53
LCATP04180 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.37■□□□□ 0.53
LCATP04180 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.37■□□□□ 0.53
LCATP04180 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LCATP04180 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LCATP04180 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.37■□□□□ 0.53
LCATP04180 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.36■□□□□ 0.53
LCATP04180 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.36■□□□□ 0.53
LCATP04180 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LCATP04180 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.36■□□□□ 0.53
LCATP04180 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.36■□□□□ 0.53
LCATP04180 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.36■□□□□ 0.53
LCATP04180 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.36■□□□□ 0.53
LCATP04180 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.36■□□□□ 0.53
LCATP04180 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
LCATP04180 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LCATP04180 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LCATP04180 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCATP04180 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LCATP04180 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms