Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQA1P01909 LINC01529-204ENST00000636474 1715 ntBASIC15.82■□□□□ 0.12
HLA-DQA1P01909 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 AC139795.1-202ENST00000500444 432 ntBASIC15.82■□□□□ 0.12
HLA-DQA1P01909 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 AC009086.3-201ENST00000623486 1008 ntBASIC15.82■□□□□ 0.12
HLA-DQA1P01909 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQA1P01909 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 DUX4L18-201ENST00000553347 1267 ntBASIC15.81■□□□□ 0.12
HLA-DQA1P01909 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 C17orf82-201ENST00000623772 1530 ntBASIC15.81■□□□□ 0.12
HLA-DQA1P01909 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQA1P01909 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DQA1P01909 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQA1P01909 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms