Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
GGPS1O95749 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GGPS1O95749 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
GGPS1O95749 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
GGPS1O95749 AC061975.6-201ENST00000579045 1553 ntBASIC23.75■■□□□ 1.39
GGPS1O95749 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GGPS1O95749 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.75■■□□□ 1.39
GGPS1O95749 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.75■■□□□ 1.39
GGPS1O95749 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.75■■□□□ 1.39
GGPS1O95749 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GGPS1O95749 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
GGPS1O95749 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
GGPS1O95749 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.75■■□□□ 1.39
GGPS1O95749 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
GGPS1O95749 AC026471.6-201ENST00000622954 1905 ntBASIC23.74■■□□□ 1.39
GGPS1O95749 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GGPS1O95749 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GGPS1O95749 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GGPS1O95749 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.74■■□□□ 1.39
GGPS1O95749 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.74■■□□□ 1.39
GGPS1O95749 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.74■■□□□ 1.39
GGPS1O95749 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.74■■□□□ 1.39
GGPS1O95749 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.74■■□□□ 1.39
GGPS1O95749 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
GGPS1O95749 KRT16P2-201ENST00000414673 1423 ntBASIC23.74■■□□□ 1.39
GGPS1O95749 AC233723.2-201ENST00000623798 2106 ntBASIC23.74■■□□□ 1.39
GGPS1O95749 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GGPS1O95749 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
GGPS1O95749 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
GGPS1O95749 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.73■■□□□ 1.39
GGPS1O95749 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.73■■□□□ 1.39
GGPS1O95749 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.73■■□□□ 1.39
GGPS1O95749 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.73■■□□□ 1.39
GGPS1O95749 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.73■■□□□ 1.39
GGPS1O95749 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GGPS1O95749 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
GGPS1O95749 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
GGPS1O95749 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GGPS1O95749 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GGPS1O95749 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.72■■□□□ 1.39
GGPS1O95749 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.72■■□□□ 1.39
GGPS1O95749 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
GGPS1O95749 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GGPS1O95749 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.72■■□□□ 1.39
GGPS1O95749 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
GGPS1O95749 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.71■■□□□ 1.39
GGPS1O95749 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GGPS1O95749 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
GGPS1O95749 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.71■■□□□ 1.39
GGPS1O95749 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GGPS1O95749 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GGPS1O95749 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.71■■□□□ 1.39
GGPS1O95749 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.71■■□□□ 1.39
GGPS1O95749 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.71■■□□□ 1.39
GGPS1O95749 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.71■■□□□ 1.39
GGPS1O95749 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GGPS1O95749 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
GGPS1O95749 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.7■■□□□ 1.38
GGPS1O95749 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.7■■□□□ 1.38
GGPS1O95749 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
GGPS1O95749 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.7■■□□□ 1.38
GGPS1O95749 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.7■■□□□ 1.38
GGPS1O95749 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
GGPS1O95749 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.7■■□□□ 1.38
GGPS1O95749 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
GGPS1O95749 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
GGPS1O95749 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 RBM17P2-201ENST00000616397 1405 ntBASIC23.69■■□□□ 1.38
GGPS1O95749 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.69■■□□□ 1.38
GGPS1O95749 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.69■■□□□ 1.38
GGPS1O95749 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.69■■□□□ 1.38
GGPS1O95749 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.69■■□□□ 1.38
GGPS1O95749 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.69■■□□□ 1.38
GGPS1O95749 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.69■■□□□ 1.38
GGPS1O95749 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.69■■□□□ 1.38
GGPS1O95749 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GGPS1O95749 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.69■■□□□ 1.38
GGPS1O95749 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms