Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.62■□□□□ 0.41
ABCA1O95477 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.62■□□□□ 0.41
ABCA1O95477 UNC93B5-201ENST00000530315 699 ntBASIC17.62■□□□□ 0.41
ABCA1O95477 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.62■□□□□ 0.41
ABCA1O95477 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.62■□□□□ 0.41
ABCA1O95477 AC008694.1-202ENST00000636953 945 ntBASIC17.62■□□□□ 0.41
ABCA1O95477 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCA1O95477 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ABCA1O95477 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ABCA1O95477 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.62■□□□□ 0.41
ABCA1O95477 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCA1O95477 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCA1O95477 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCA1O95477 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCA1O95477 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCA1O95477 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCA1O95477 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
ABCA1O95477 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
ABCA1O95477 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 AP004607.7-201ENST00000527152 1677 ntBASIC17.61■□□□□ 0.41
ABCA1O95477 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ABCA1O95477 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCA1O95477 TERF1P5-201ENST00000477545 1207 ntBASIC17.61■□□□□ 0.41
ABCA1O95477 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCA1O95477 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.61■□□□□ 0.41
ABCA1O95477 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
ABCA1O95477 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA1O95477 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.6■□□□□ 0.41
ABCA1O95477 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.6■□□□□ 0.41
ABCA1O95477 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ABCA1O95477 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCA1O95477 BX276092.2-201ENST00000417668 665 ntBASIC17.6■□□□□ 0.41
ABCA1O95477 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCA1O95477 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCA1O95477 OR10C1-204ENST00000622521 1039 ntBASIC17.6■□□□□ 0.41
ABCA1O95477 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ABCA1O95477 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCA1O95477 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ABCA1O95477 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA1O95477 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.59■□□□□ 0.41
ABCA1O95477 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCA1O95477 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA1O95477 AL158047.1-201ENST00000445918 881 ntBASIC17.59■□□□□ 0.41
ABCA1O95477 AC091874.3-201ENST00000512672 1195 ntBASIC17.59■□□□□ 0.41
ABCA1O95477 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCA1O95477 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCA1O95477 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ABCA1O95477 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.58■□□□□ 0.4
ABCA1O95477 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 RARRES2P4-201ENST00000514074 484 ntBASIC17.58■□□□□ 0.4
ABCA1O95477 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.58■□□□□ 0.4
ABCA1O95477 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA1O95477 C1orf229-201ENST00000623686 2258 ntBASIC17.58■□□□□ 0.4
ABCA1O95477 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ABCA1O95477 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.58■□□□□ 0.4
ABCA1O95477 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA1O95477 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms