Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH4O75427 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH4O75427 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.99■■□□□ 1.11
LRCH4O75427 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH4O75427 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRCH4O75427 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.99■■□□□ 1.11
LRCH4O75427 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LRCH4O75427 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
LRCH4O75427 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
LRCH4O75427 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 ZNRF2P3-201ENST00000424200 374 ntBASIC21.98■■□□□ 1.11
LRCH4O75427 EEF1DP3-203ENST00000566025 782 ntBASIC21.98■■□□□ 1.11
LRCH4O75427 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.98■■□□□ 1.11
LRCH4O75427 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.98■■□□□ 1.11
LRCH4O75427 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRCH4O75427 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LRCH4O75427 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
LRCH4O75427 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.97■■□□□ 1.11
LRCH4O75427 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.97■■□□□ 1.11
LRCH4O75427 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.97■■□□□ 1.11
LRCH4O75427 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.97■■□□□ 1.11
LRCH4O75427 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRCH4O75427 AL049796.1-201ENST00000565336 1766 ntBASIC21.97■■□□□ 1.11
LRCH4O75427 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
LRCH4O75427 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH4O75427 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.96■■□□□ 1.11
LRCH4O75427 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH4O75427 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LRCH4O75427 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH4O75427 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.96■■□□□ 1.11
LRCH4O75427 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.96■■□□□ 1.11
LRCH4O75427 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LRCH4O75427 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH4O75427 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRCH4O75427 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRCH4O75427 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
LRCH4O75427 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.96■■□□□ 1.11
LRCH4O75427 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
LRCH4O75427 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.95■■□□□ 1.1
LRCH4O75427 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 AC053503.5-201ENST00000601508 636 ntBASIC21.95■■□□□ 1.1
LRCH4O75427 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRCH4O75427 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.95■■□□□ 1.1
LRCH4O75427 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.95■■□□□ 1.1
LRCH4O75427 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.94■■□□□ 1.1
LRCH4O75427 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LRCH4O75427 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LRCH4O75427 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.94■■□□□ 1.1
LRCH4O75427 AC079140.4-201ENST00000507448 529 ntBASIC21.94■■□□□ 1.1
LRCH4O75427 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRCH4O75427 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH4O75427 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
LRCH4O75427 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH4O75427 LINC02228-203ENST00000641970 1355 ntBASIC21.93■■□□□ 1.1
LRCH4O75427 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRCH4O75427 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH4O75427 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH4O75427 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH4O75427 KRT87P-202ENST00000534226 1464 ntBASIC21.92■■□□□ 1.1
LRCH4O75427 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
LRCH4O75427 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.92■■□□□ 1.1
LRCH4O75427 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH4O75427 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LRCH4O75427 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LRCH4O75427 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRCH4O75427 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH4O75427 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.91■■□□□ 1.1
LRCH4O75427 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH4O75427 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH4O75427 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.91■■□□□ 1.1
LRCH4O75427 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH4O75427 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRCH4O75427 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.91■■□□□ 1.1
LRCH4O75427 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.91■■□□□ 1.1
LRCH4O75427 AC123595.1-201ENST00000440769 1046 ntBASIC21.91■■□□□ 1.1
LRCH4O75427 YBX1P1-201ENST00000445822 960 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms