Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LCMT2O60294 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.22■□□□□ 0.83
LCMT2O60294 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.22■□□□□ 0.83
LCMT2O60294 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.22■□□□□ 0.83
LCMT2O60294 AL162430.1-201ENST00000480705 870 ntBASIC20.22■□□□□ 0.83
LCMT2O60294 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.22■□□□□ 0.83
LCMT2O60294 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LCMT2O60294 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LCMT2O60294 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.22■□□□□ 0.83
LCMT2O60294 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 Z98882.1-201ENST00000622160 2253 ntBASIC20.22■□□□□ 0.83
LCMT2O60294 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LCMT2O60294 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCMT2O60294 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LCMT2O60294 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.21■□□□□ 0.83
LCMT2O60294 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.21■□□□□ 0.83
LCMT2O60294 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.21■□□□□ 0.83
LCMT2O60294 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.21■□□□□ 0.83
LCMT2O60294 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCMT2O60294 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCMT2O60294 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.21■□□□□ 0.83
LCMT2O60294 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LCMT2O60294 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LCMT2O60294 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
LCMT2O60294 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.21■□□□□ 0.83
LCMT2O60294 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.21■□□□□ 0.83
LCMT2O60294 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LCMT2O60294 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.2■□□□□ 0.82
LCMT2O60294 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LCMT2O60294 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LCMT2O60294 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.2■□□□□ 0.82
LCMT2O60294 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.2■□□□□ 0.82
LCMT2O60294 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.2■□□□□ 0.82
LCMT2O60294 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.2■□□□□ 0.82
LCMT2O60294 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.2■□□□□ 0.82
LCMT2O60294 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
LCMT2O60294 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
LCMT2O60294 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.19■□□□□ 0.82
LCMT2O60294 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.19■□□□□ 0.82
LCMT2O60294 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.19■□□□□ 0.82
LCMT2O60294 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.19■□□□□ 0.82
LCMT2O60294 AC138907.5-202ENST00000569484 235 ntBASIC20.19■□□□□ 0.82
LCMT2O60294 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LCMT2O60294 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.18■□□□□ 0.82
LCMT2O60294 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.18■□□□□ 0.82
LCMT2O60294 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
LCMT2O60294 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.18■□□□□ 0.82
LCMT2O60294 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.18■□□□□ 0.82
LCMT2O60294 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LCMT2O60294 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.18■□□□□ 0.82
LCMT2O60294 AC026310.3-201ENST00000625186 2373 ntBASIC20.18■□□□□ 0.82
LCMT2O60294 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LCMT2O60294 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
LCMT2O60294 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCMT2O60294 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.17■□□□□ 0.82
LCMT2O60294 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.17■□□□□ 0.82
LCMT2O60294 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
LCMT2O60294 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.17■□□□□ 0.82
LCMT2O60294 AP001160.3-201ENST00000601484 763 ntBASIC20.17■□□□□ 0.82
LCMT2O60294 AC007375.3-201ENST00000600936 2314 ntBASIC20.17■□□□□ 0.82
LCMT2O60294 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LCMT2O60294 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LCMT2O60294 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCMT2O60294 AC061975.6-201ENST00000579045 1553 ntBASIC20.17■□□□□ 0.82
LCMT2O60294 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
LCMT2O60294 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms