Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKNO60260 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.65■□□□□ 0.74
PRKNO60260 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKNO60260 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKNO60260 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRKNO60260 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.65■□□□□ 0.74
PRKNO60260 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PRKNO60260 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.64■□□□□ 0.74
PRKNO60260 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRKNO60260 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRKNO60260 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.64■□□□□ 0.73
PRKNO60260 AC138907.5-202ENST00000569484 235 ntBASIC19.64■□□□□ 0.73
PRKNO60260 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
PRKNO60260 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.64■□□□□ 0.73
PRKNO60260 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.64■□□□□ 0.73
PRKNO60260 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.64■□□□□ 0.73
PRKNO60260 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.64■□□□□ 0.73
PRKNO60260 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.64■□□□□ 0.73
PRKNO60260 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.64■□□□□ 0.73
PRKNO60260 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRKNO60260 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRKNO60260 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.63■□□□□ 0.73
PRKNO60260 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.63■□□□□ 0.73
PRKNO60260 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.63■□□□□ 0.73
PRKNO60260 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.63■□□□□ 0.73
PRKNO60260 AC010141.2-201ENST00000452426 721 ntBASIC19.63■□□□□ 0.73
PRKNO60260 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.63■□□□□ 0.73
PRKNO60260 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.63■□□□□ 0.73
PRKNO60260 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRKNO60260 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
PRKNO60260 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.62■□□□□ 0.73
PRKNO60260 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.62■□□□□ 0.73
PRKNO60260 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.62■□□□□ 0.73
PRKNO60260 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.62■□□□□ 0.73
PRKNO60260 UBE2DNL-204ENST00000602536 740 ntBASIC19.62■□□□□ 0.73
PRKNO60260 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRKNO60260 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRKNO60260 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKNO60260 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
PRKNO60260 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.61■□□□□ 0.73
PRKNO60260 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 RARRES2P11-201ENST00000635158 484 ntBASIC19.61■□□□□ 0.73
PRKNO60260 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRKNO60260 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRKNO60260 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PRKNO60260 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.6■□□□□ 0.73
PRKNO60260 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PRKNO60260 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.6■□□□□ 0.73
PRKNO60260 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.6■□□□□ 0.73
PRKNO60260 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.6■□□□□ 0.73
PRKNO60260 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.6■□□□□ 0.73
PRKNO60260 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.6■□□□□ 0.73
PRKNO60260 AC011767.1-201ENST00000617410 1153 ntBASIC19.6■□□□□ 0.73
PRKNO60260 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRKNO60260 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRKNO60260 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRKNO60260 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
PRKNO60260 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PRKNO60260 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRKNO60260 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.59■□□□□ 0.73
PRKNO60260 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms