Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 Z98882.1-201ENST00000622160 2253 ntBASIC20.22■□□□□ 0.83
NDUFS4O43181 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 AC004854.2-201ENST00000608450 1441 ntBASIC20.21■□□□□ 0.83
NDUFS4O43181 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS4O43181 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.21■□□□□ 0.83
NDUFS4O43181 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NDUFS4O43181 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NDUFS4O43181 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS4O43181 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
NDUFS4O43181 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFS4O43181 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFS4O43181 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NDUFS4O43181 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.2■□□□□ 0.82
NDUFS4O43181 EEF1DP3-203ENST00000566025 782 ntBASIC20.2■□□□□ 0.82
NDUFS4O43181 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.2■□□□□ 0.82
NDUFS4O43181 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFS4O43181 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.2■□□□□ 0.82
NDUFS4O43181 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
NDUFS4O43181 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.19■□□□□ 0.82
NDUFS4O43181 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.19■□□□□ 0.82
NDUFS4O43181 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.19■□□□□ 0.82
NDUFS4O43181 NTF6G-201ENST00000591094 616 ntBASIC20.19■□□□□ 0.82
NDUFS4O43181 AC053503.5-201ENST00000601508 636 ntBASIC20.19■□□□□ 0.82
NDUFS4O43181 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.19■□□□□ 0.82
NDUFS4O43181 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.19■□□□□ 0.82
NDUFS4O43181 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NDUFS4O43181 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.19■□□□□ 0.82
NDUFS4O43181 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFS4O43181 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
NDUFS4O43181 AP004607.4-201ENST00000530158 1459 ntBASIC20.18■□□□□ 0.82
NDUFS4O43181 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.18■□□□□ 0.82
NDUFS4O43181 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS4O43181 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFS4O43181 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFS4O43181 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFS4O43181 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 AC104187.1-201ENST00000607510 612 ntBASIC20.18■□□□□ 0.82
NDUFS4O43181 CLDN5-201ENST00000403084 2357 ntBASIC20.18■□□□□ 0.82
NDUFS4O43181 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.18■□□□□ 0.82
NDUFS4O43181 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS4O43181 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFS4O43181 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
NDUFS4O43181 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NDUFS4O43181 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NDUFS4O43181 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFS4O43181 AC007375.3-201ENST00000600936 2314 ntBASIC20.18■□□□□ 0.82
NDUFS4O43181 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS4O43181 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS4O43181 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
NDUFS4O43181 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.17■□□□□ 0.82
NDUFS4O43181 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NDUFS4O43181 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.17■□□□□ 0.82
NDUFS4O43181 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS4O43181 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NDUFS4O43181 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NDUFS4O43181 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NDUFS4O43181 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.16■□□□□ 0.82
NDUFS4O43181 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms