Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC34.77■■■■□ 3.16
CHD1O14646 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC34.77■■■■□ 3.16
CHD1O14646 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC34.77■■■■□ 3.16
CHD1O14646 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CHD1O14646 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
CHD1O14646 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CHD1O14646 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.16
CHD1O14646 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CHD1O14646 SERF2-207ENST00000409614 582 ntTSL 2 BASIC34.76■■■■□ 3.16
CHD1O14646 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC34.76■■■■□ 3.16
CHD1O14646 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC34.76■■■■□ 3.16
CHD1O14646 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC34.76■■■■□ 3.16
CHD1O14646 AC124016.1-201ENST00000609552 612 ntBASIC34.76■■■■□ 3.16
CHD1O14646 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC34.76■■■■□ 3.15
CHD1O14646 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CHD1O14646 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.15
CHD1O14646 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CHD1O14646 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.15
CHD1O14646 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC34.75■■■■□ 3.15
CHD1O14646 RNF146-206ENST00000480444 843 ntTSL 2 BASIC34.75■■■■□ 3.15
CHD1O14646 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC34.75■■■■□ 3.15
CHD1O14646 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CHD1O14646 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC34.74■■■■□ 3.15
CHD1O14646 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CHD1O14646 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CHD1O14646 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CHD1O14646 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CHD1O14646 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC34.73■■■■□ 3.15
CHD1O14646 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC34.73■■■■□ 3.15
CHD1O14646 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
CHD1O14646 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
CHD1O14646 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC34.73■■■■□ 3.15
CHD1O14646 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC34.73■■■■□ 3.15
CHD1O14646 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
CHD1O14646 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC34.72■■■■□ 3.15
CHD1O14646 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
CHD1O14646 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 OR7E47P-201ENST00000546390 1422 ntBASIC34.72■■■■□ 3.15
CHD1O14646 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.72■■■■□ 3.15
CHD1O14646 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC34.72■■■■□ 3.15
CHD1O14646 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC34.72■■■■□ 3.15
CHD1O14646 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC34.72■■■■□ 3.15
CHD1O14646 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC34.72■■■■□ 3.15
CHD1O14646 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CHD1O14646 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CHD1O14646 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC34.71■■■■□ 3.15
CHD1O14646 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC34.71■■■■□ 3.15
CHD1O14646 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC34.71■■■■□ 3.15
CHD1O14646 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC34.71■■■■□ 3.15
CHD1O14646 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CHD1O14646 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC34.71■■■■□ 3.15
CHD1O14646 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CHD1O14646 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC34.7■■■■□ 3.15
CHD1O14646 FAM21FP-204ENST00000608637 956 ntBASIC34.7■■■■□ 3.15
CHD1O14646 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHD1O14646 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHD1O14646 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHD1O14646 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC34.7■■■■□ 3.15
CHD1O14646 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC34.7■■■■□ 3.15
CHD1O14646 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CHD1O14646 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
CHD1O14646 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC34.69■■■■□ 3.14
CHD1O14646 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC34.69■■■■□ 3.14
CHD1O14646 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC34.69■■■■□ 3.14
CHD1O14646 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC34.69■■■■□ 3.14
CHD1O14646 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC34.69■■■■□ 3.14
CHD1O14646 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 AC133681.1-201ENST00000465482 601 ntBASIC34.69■■■■□ 3.14
CHD1O14646 PENK-204ENST00000518770 863 ntTSL 2 BASIC34.69■■■■□ 3.14
CHD1O14646 LY6E-205ENST00000519611 635 ntTSL 3 BASIC34.69■■■■□ 3.14
CHD1O14646 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC34.69■■■■□ 3.14
CHD1O14646 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CHD1O14646 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CHD1O14646 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms