Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN4O14493 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN4O14493 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN4O14493 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN4O14493 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN4O14493 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN4O14493 AC120498.10-201ENST00000621827 505 ntBASIC19.86■□□□□ 0.77
CLDN4O14493 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN4O14493 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN4O14493 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLDN4O14493 FBXW4P1-201ENST00000426721 2239 ntBASIC19.86■□□□□ 0.77
CLDN4O14493 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN4O14493 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN4O14493 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 POU5F1P4-201ENST00000413175 1085 ntBASIC19.85■□□□□ 0.77
CLDN4O14493 AC010141.2-201ENST00000452426 721 ntBASIC19.85■□□□□ 0.77
CLDN4O14493 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN4O14493 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLDN4O14493 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CLDN4O14493 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLDN4O14493 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN4O14493 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN4O14493 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDN4O14493 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDN4O14493 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 KRT18P20-201ENST00000548986 1279 ntBASIC19.84■□□□□ 0.77
CLDN4O14493 AC137761.2-201ENST00000561729 223 ntBASIC19.84■□□□□ 0.77
CLDN4O14493 AC145350.3-201ENST00000569033 163 ntBASIC19.84■□□□□ 0.77
CLDN4O14493 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CLDN4O14493 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDN4O14493 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLDN4O14493 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN4O14493 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN4O14493 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDN4O14493 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN4O14493 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN4O14493 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN4O14493 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN4O14493 KRT18P61-201ENST00000585825 1298 ntBASIC19.83■□□□□ 0.77
CLDN4O14493 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN4O14493 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN4O14493 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN4O14493 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN4O14493 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN4O14493 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.83■□□□□ 0.76
CLDN4O14493 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN4O14493 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 AC244015.2-201ENST00000616358 1861 ntBASIC19.82■□□□□ 0.76
CLDN4O14493 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 AC016769.1-201ENST00000409132 1010 ntBASIC19.82■□□□□ 0.76
CLDN4O14493 KRT18P11-201ENST00000435214 1283 ntBASIC19.82■□□□□ 0.76
CLDN4O14493 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN4O14493 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN4O14493 AC022517.1-201ENST00000592429 346 ntBASIC19.82■□□□□ 0.76
CLDN4O14493 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN4O14493 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN4O14493 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN4O14493 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN4O14493 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CLDN4O14493 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms