Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL21O00585 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCL21O00585 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.68■□□□□ 0.58
CCL21O00585 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCL21O00585 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL21O00585 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL21O00585 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCL21O00585 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.68■□□□□ 0.58
CCL21O00585 AC073648.6-201ENST00000641589 218 ntBASIC18.68■□□□□ 0.58
CCL21O00585 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.68■□□□□ 0.58
CCL21O00585 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL21O00585 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCL21O00585 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCL21O00585 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCL21O00585 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCL21O00585 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.67■□□□□ 0.58
CCL21O00585 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL21O00585 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.67■□□□□ 0.58
CCL21O00585 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.67■□□□□ 0.58
CCL21O00585 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL21O00585 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL21O00585 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL21O00585 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCL21O00585 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL21O00585 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL21O00585 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.66■□□□□ 0.58
CCL21O00585 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL21O00585 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
CCL21O00585 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL21O00585 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.65■□□□□ 0.58
CCL21O00585 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.65■□□□□ 0.58
CCL21O00585 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL21O00585 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCL21O00585 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.64■□□□□ 0.58
CCL21O00585 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCL21O00585 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.64■□□□□ 0.58
CCL21O00585 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.64■□□□□ 0.57
CCL21O00585 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCL21O00585 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL21O00585 AL355472.2-201ENST00000422958 438 ntBASIC18.64■□□□□ 0.57
CCL21O00585 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL21O00585 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.64■□□□□ 0.57
CCL21O00585 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL21O00585 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL21O00585 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL21O00585 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL21O00585 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL21O00585 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL21O00585 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL21O00585 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.63■□□□□ 0.57
CCL21O00585 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL21O00585 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
CCL21O00585 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL21O00585 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL21O00585 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL21O00585 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCL21O00585 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL21O00585 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL21O00585 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL21O00585 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.62■□□□□ 0.57
CCL21O00585 UBE2SP1-201ENST00000450587 669 ntBASIC18.62■□□□□ 0.57
CCL21O00585 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL21O00585 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
CCL21O00585 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL21O00585 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL21O00585 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL21O00585 KRT17P1-201ENST00000399211 1546 ntBASIC18.62■□□□□ 0.57
CCL21O00585 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms