Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK2O00526 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.9■□□□□ 0.3
UPK2O00526 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK2O00526 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK2O00526 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
UPK2O00526 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.9■□□□□ 0.3
UPK2O00526 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UPK2O00526 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.9■□□□□ 0.3
UPK2O00526 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK2O00526 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.9■□□□□ 0.3
UPK2O00526 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UPK2O00526 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
UPK2O00526 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.89■□□□□ 0.3
UPK2O00526 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UPK2O00526 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
UPK2O00526 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.89■□□□□ 0.29
UPK2O00526 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UPK2O00526 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.89■□□□□ 0.29
UPK2O00526 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.89■□□□□ 0.29
UPK2O00526 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UPK2O00526 AC008406.3-201ENST00000620001 1374 ntBASIC16.89■□□□□ 0.29
UPK2O00526 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
UPK2O00526 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UPK2O00526 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK2O00526 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
UPK2O00526 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.88■□□□□ 0.29
UPK2O00526 AC099791.1-201ENST00000416440 715 ntBASIC16.88■□□□□ 0.29
UPK2O00526 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.88■□□□□ 0.29
UPK2O00526 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK2O00526 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.88■□□□□ 0.29
UPK2O00526 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 AC105233.4-201ENST00000642045 216 ntBASIC16.88■□□□□ 0.29
UPK2O00526 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK2O00526 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.88■□□□□ 0.29
UPK2O00526 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
UPK2O00526 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UPK2O00526 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.88■□□□□ 0.29
UPK2O00526 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UPK2O00526 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.87■□□□□ 0.29
UPK2O00526 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.87■□□□□ 0.29
UPK2O00526 AC096631.2-201ENST00000436136 790 ntBASIC16.87■□□□□ 0.29
UPK2O00526 PBX2P1-201ENST00000493219 1291 ntBASIC16.87■□□□□ 0.29
UPK2O00526 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 AC055733.4-201ENST00000638462 1354 ntBASIC16.87■□□□□ 0.29
UPK2O00526 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.87■□□□□ 0.29
UPK2O00526 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UPK2O00526 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK2O00526 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UPK2O00526 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms