Protein–RNA interactions for Protein: O00505

KPNA3, Importin subunit alpha-4, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3O00505 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.24■□□□□ 0.99
KPNA3O00505 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.24■□□□□ 0.99
KPNA3O00505 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.24■□□□□ 0.99
KPNA3O00505 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
KPNA3O00505 AC005181.1-201ENST00000604782 1256 ntBASIC21.24■□□□□ 0.99
KPNA3O00505 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.24■□□□□ 0.99
KPNA3O00505 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.24■□□□□ 0.99
KPNA3O00505 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.24■□□□□ 0.99
KPNA3O00505 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.24■□□□□ 0.99
KPNA3O00505 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.24■□□□□ 0.99
KPNA3O00505 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
KPNA3O00505 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA3O00505 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.23■□□□□ 0.99
KPNA3O00505 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.23■□□□□ 0.99
KPNA3O00505 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.23■□□□□ 0.99
KPNA3O00505 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
KPNA3O00505 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.23■□□□□ 0.99
KPNA3O00505 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA3O00505 AC061975.6-201ENST00000579045 1553 ntBASIC21.23■□□□□ 0.99
KPNA3O00505 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
KPNA3O00505 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 NCF1B-203ENST00000435988 1254 ntBASIC21.22■□□□□ 0.99
KPNA3O00505 CNN2P6-201ENST00000439038 900 ntBASIC21.22■□□□□ 0.99
KPNA3O00505 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.22■□□□□ 0.99
KPNA3O00505 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.22■□□□□ 0.99
KPNA3O00505 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.22■□□□□ 0.99
KPNA3O00505 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KPNA3O00505 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.22■□□□□ 0.99
KPNA3O00505 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KPNA3O00505 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
KPNA3O00505 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KPNA3O00505 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA3O00505 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.22■□□□□ 0.99
KPNA3O00505 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KPNA3O00505 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.21■□□□□ 0.99
KPNA3O00505 TERF1P5-201ENST00000477545 1207 ntBASIC21.21■□□□□ 0.99
KPNA3O00505 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.21■□□□□ 0.99
KPNA3O00505 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 AL109923.1-201ENST00000618799 583 ntBASIC21.21■□□□□ 0.99
KPNA3O00505 AC013268.1-206ENST00000638368 961 ntBASIC21.21■□□□□ 0.99
KPNA3O00505 AC112229.1-201ENST00000639295 961 ntBASIC21.21■□□□□ 0.99
KPNA3O00505 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KPNA3O00505 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA3O00505 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.21■□□□□ 0.99
KPNA3O00505 KRT16P2-201ENST00000414673 1423 ntBASIC21.21■□□□□ 0.99
KPNA3O00505 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.2■□□□□ 0.98
KPNA3O00505 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 GPX1P1-201ENST00000388829 606 ntBASIC21.2■□□□□ 0.98
KPNA3O00505 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 AC104771.1-201ENST00000603335 964 ntBASIC21.2■□□□□ 0.98
KPNA3O00505 AL050303.2-201ENST00000619798 666 ntBASIC21.2■□□□□ 0.98
KPNA3O00505 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA3O00505 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA3O00505 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA3O00505 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KPNA3O00505 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA3O00505 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.19■□□□□ 0.98
KPNA3O00505 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA3O00505 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA3O00505 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.19■□□□□ 0.98
KPNA3O00505 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA3O00505 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA3O00505 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA3O00505 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA3O00505 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA3O00505 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.18■□□□□ 0.98
KPNA3O00505 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.18■□□□□ 0.98
KPNA3O00505 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms