Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TNFRSF11BO00300 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TNFRSF11BO00300 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 KRT16P3-201ENST00000439127 1283 ntBASIC19.45■□□□□ 0.7
TNFRSF11BO00300 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.45■□□□□ 0.7
TNFRSF11BO00300 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 AL121603.2-201ENST00000557373 2117 ntBASIC19.44■□□□□ 0.7
TNFRSF11BO00300 AL356740.2-201ENST00000601559 647 ntBASIC19.44■□□□□ 0.7
TNFRSF11BO00300 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TNFRSF11BO00300 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 AC092171.4-201ENST00000609130 632 ntBASIC19.43■□□□□ 0.7
TNFRSF11BO00300 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF11BO00300 AC006128.1-201ENST00000624704 1661 ntBASIC19.43■□□□□ 0.7
TNFRSF11BO00300 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF11BO00300 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
TNFRSF11BO00300 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms