Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CGB1A6NKQ9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CGB1A6NKQ9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 TSPY26P-201ENST00000476365 1326 ntBASIC16.83■□□□□ 0.28
CGB1A6NKQ9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 AC027682.1-201ENST00000562846 899 ntBASIC16.83■□□□□ 0.28
CGB1A6NKQ9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 AL031432.3-201ENST00000607698 485 ntBASIC16.83■□□□□ 0.28
CGB1A6NKQ9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CGB1A6NKQ9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.82■□□□□ 0.28
CGB1A6NKQ9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CGB1A6NKQ9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 EDA-201ENST00000338901 1233 ntBASIC16.81■□□□□ 0.28
CGB1A6NKQ9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 MIR939-201ENST00000401314 82 ntBASIC16.81■□□□□ 0.28
CGB1A6NKQ9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CGB1A6NKQ9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 AC055733.4-201ENST00000638462 1354 ntBASIC16.8■□□□□ 0.28
CGB1A6NKQ9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 AF213884.3-201ENST00000563833 479 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms