Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 CDCA4P2-201ENST00000441182 718 ntBASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 KRT18P20-201ENST00000548986 1279 ntBASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 MFSD11-216ENST00000590393 1141 ntBASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 AC011767.1-201ENST00000617410 1153 ntBASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 BID-214ENST00000617586 542 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM200CA6NKL6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 EP400NL-214ENST00000641289 2402 ntBASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 SLC7A5P2-201ENST00000553010 536 ntBASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 AC073111.5-205ENST00000641717 521 ntBASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEM200CA6NKL6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 MYCNOS-205ENST00000641950 531 ntBASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 C11orf96-202ENST00000528572 1834 ntBASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEM200CA6NKL6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
TMEM200CA6NKL6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM200CA6NKL6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TMEM200CA6NKL6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.52■□□□□ 0.71
TMEM200CA6NKL6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEM200CA6NKL6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEM200CA6NKL6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms