Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC144AA2RUR9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC144AA2RUR9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.53■■■□□ 2.48
CCDC144AA2RUR9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC144AA2RUR9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC144AA2RUR9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.51■■■□□ 2.48
CCDC144AA2RUR9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.51■■■□□ 2.47
CCDC144AA2RUR9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.51■■■□□ 2.47
CCDC144AA2RUR9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.51■■■□□ 2.47
CCDC144AA2RUR9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.51■■■□□ 2.47
CCDC144AA2RUR9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCDC144AA2RUR9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 AC068473.5-201ENST00000616428 2072 ntBASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 AL512625.2-201ENST00000417533 625 ntBASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 AC133041.1-202ENST00000642053 222 ntBASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC144AA2RUR9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 MIPEPP3-201ENST00000412105 444 ntBASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
CCDC144AA2RUR9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 AC008694.1-202ENST00000636953 945 ntBASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC144AA2RUR9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 AL591742.1-201ENST00000604433 565 ntBASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 C11orf96-202ENST00000528572 1834 ntBASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 AC092118.2-201ENST00000613495 667 ntBASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC144AA2RUR9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 AC242852.2-201ENST00000615738 1807 ntBASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC144AA2RUR9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.45■■■□□ 2.47
CCDC144AA2RUR9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC30.45■■■□□ 2.47
CCDC144AA2RUR9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCDC144AA2RUR9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 RARRES2P4-201ENST00000514074 484 ntBASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 MIR4758-201ENST00000577688 71 ntBASIC30.45■■■□□ 2.46
CCDC144AA2RUR9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms