Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TCRBV9S1A1TA0A576 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 AC133561.4-201ENST00000566112 224 ntBASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TCRBV9S1A1TA0A576 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TCRBV9S1A1TA0A576 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.2■□□□□ 0.99
TCRBV9S1A1TA0A576 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.2■□□□□ 0.99
TCRBV9S1A1TA0A576 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TCRBV9S1A1TA0A576 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TCRBV9S1A1TA0A576 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.2■□□□□ 0.98
TCRBV9S1A1TA0A576 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 PLK5-205ENST00000642079 1969 ntBASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 AC092667.1-201ENST00000434301 2586 ntBASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 BX842568.3-201ENST00000418104 571 ntBASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TCRBV9S1A1TA0A576 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 AC006128.1-201ENST00000624704 1661 ntBASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 MIR4767-201ENST00000582827 78 ntBASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TCRBV9S1A1TA0A576 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.17■□□□□ 0.98
TCRBV9S1A1TA0A576 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms