Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
A0A1W2PRF3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 AC010542.4-201ENST00000563151 1910 ntBASIC17.31■□□□□ 0.36
A0A1W2PRF3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
A0A1W2PRF3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 AP001160.3-201ENST00000601484 763 ntBASIC17.3■□□□□ 0.36
A0A1W2PRF3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
A0A1W2PRF3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
A0A1W2PRF3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
A0A1W2PRF3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
A0A1W2PRF3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.29■□□□□ 0.36
A0A1W2PRF3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.29■□□□□ 0.36
A0A1W2PRF3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
A0A1W2PRF3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
A0A1W2PRF3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
A0A1W2PRF3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
A0A1W2PRF3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
A0A1W2PRF3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 AC003102.1-202ENST00000563394 1796 ntBASIC17.28■□□□□ 0.36
A0A1W2PRF3 EP400NL-214ENST00000641289 2402 ntBASIC17.28■□□□□ 0.36
A0A1W2PRF3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
A0A1W2PRF3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.28■□□□□ 0.36
A0A1W2PRF3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.27■□□□□ 0.36
A0A1W2PRF3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.27■□□□□ 0.36
A0A1W2PRF3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
A0A1W2PRF3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 AC090192.1-201ENST00000517740 490 ntBASIC17.27■□□□□ 0.36
A0A1W2PRF3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.27■□□□□ 0.36
A0A1W2PRF3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 UBE2DNL-204ENST00000602536 740 ntBASIC17.27■□□□□ 0.36
A0A1W2PRF3 AC011767.1-201ENST00000617410 1153 ntBASIC17.27■□□□□ 0.36
A0A1W2PRF3 RARRES2P11-201ENST00000635158 484 ntBASIC17.27■□□□□ 0.36
A0A1W2PRF3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
A0A1W2PRF3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
A0A1W2PRF3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.27■□□□□ 0.35
A0A1W2PRF3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
A0A1W2PRF3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
A0A1W2PRF3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.26■□□□□ 0.35
A0A1W2PRF3 AC080038.1-201ENST00000611274 1154 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms