Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 AC079140.4-201ENST00000507448 529 ntBASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 TERF1P2-201ENST00000583350 1212 ntBASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV2A0A0B4J234 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 AC053503.5-201ENST00000601508 636 ntBASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 KRT87P-202ENST00000534226 1464 ntBASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 AC010542.4-201ENST00000563151 1910 ntBASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV2A0A0B4J234 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 AC138932.1-201ENST00000534164 6830 ntBASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 EEF1DP3-203ENST00000566025 782 ntBASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV2A0A0B4J234 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRAV2A0A0B4J234 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV2A0A0B4J234 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms