Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 JUP-207ENST00000437369 586 ntTSL 312.18□□□□□ -0.462e-19■□□□□ 8.4
DDX3XO00571 GNL3L-201ENST00000336470 2357 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.491e-6■□□□□ 8.4
DDX3XO00571 WBP2-210ENST00000589241 557 ntTSL 211.96□□□□□ -0.495e-9■□□□□ 8.4
DDX3XO00571 ESCO1-202ENST00000383276 4773 ntTSL 211.91□□□□□ -0.51e-6■□□□□ 8.4
DDX3XO00571 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.511e-6■□□□□ 8.4
DDX3XO00571 MYO19-227ENST00000622055 897 ntTSL 311.82□□□□□ -0.525e-16■□□□□ 8.4
DDX3XO00571 PDXK-213ENST00000472777 460 ntTSL 511.7□□□□□ -0.541e-13■□□□□ 8.4
DDX3XO00571 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.543e-26■□□□□ 8.4
DDX3XO00571 HK1-201ENST00000298649 3596 ntTSL 5 BASIC11.51□□□□□ -0.573e-18■□□□□ 8.4
DDX3XO00571 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.572e-11■□□□□ 8.4
DDX3XO00571 ESCO1-203ENST00000580101 575 ntTSL 411.3□□□□□ -0.61e-6■□□□□ 8.4
DDX3XO00571 ZSCAN9-205ENST00000527844 1182 ntTSL 511.27□□□□□ -0.611e-6■□□□□ 8.4
DDX3XO00571 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC11.24□□□□□ -0.611e-13■□□□□ 8.4
DDX3XO00571 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC11.24□□□□□ -0.611e-6■□□□□ 8.4
DDX3XO00571 ADH5-212ENST00000512991 880 ntTSL 511.14□□□□□ -0.631e-6■□□□□ 8.4
DDX3XO00571 WBP2-206ENST00000587374 480 ntTSL 411.11□□□□□ -0.635e-9■□□□□ 8.4
DDX3XO00571 UBE2Z-204ENST00000506498 766 ntTSL 411.05□□□□□ -0.649e-8■□□□□ 8.4
DDX3XO00571 WBP2-217ENST00000592802 574 ntTSL 211.03□□□□□ -0.645e-9■□□□□ 8.4
DDX3XO00571 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.641e-6■□□□□ 8.4
DDX3XO00571 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.641e-6■□□□□ 8.4
DDX3XO00571 RAB3GAP2-207ENST00000478976 575 ntTSL 411□□□□□ -0.652e-11■□□□□ 8.4
DDX3XO00571 CENPC-203ENST00000506882 3436 ntTSL 1 (best)10.96□□□□□ -0.667e-8■□□□□ 8.4
DDX3XO00571 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC10.89□□□□□ -0.675e-16■□□□□ 8.4
DDX3XO00571 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC10.85□□□□□ -0.675e-16■□□□□ 8.4
DDX3XO00571 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.693e-26■□□□□ 8.4
DDX3XO00571 WDR36-204ENST00000513710 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.735e-16■□□□□ 8.4
DDX3XO00571 HK1-206ENST00000448642 3868 ntTSL 5 BASIC10.37□□□□□ -0.753e-18■□□□□ 8.4
DDX3XO00571 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.777e-8■□□□□ 8.4
DDX3XO00571 ADH5-204ENST00000503130 786 ntTSL 310.23□□□□□ -0.771e-6■□□□□ 8.4
DDX3XO00571 PDXK-216ENST00000481512 583 ntTSL 510.16□□□□□ -0.781e-13■□□□□ 8.4
DDX3XO00571 RAB3GAP2-203ENST00000462353 1906 ntTSL 1 (best)10.13□□□□□ -0.792e-11■□□□□ 8.4
DDX3XO00571 WDYHV1-204ENST00000519199 949 ntTSL 210.1□□□□□ -0.791e-6■□□□□ 8.4
DDX3XO00571 HK1-212ENST00000480047 575 ntTSL 1 (best)9.97□□□□□ -0.813e-18■□□□□ 8.4
DDX3XO00571 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.821e-6■□□□□ 8.4
DDX3XO00571 RAB3GAP2-204ENST00000474178 539 ntTSL 49.53□□□□□ -0.882e-11■□□□□ 8.4
DDX3XO00571 CHFR-220ENST00000541817 758 ntTSL 59.5□□□□□ -0.891e-6■□□□□ 8.4
DDX3XO00571 VCL-207ENST00000624354 3307 ntTSL 29.43□□□□□ -0.93e-26■□□□□ 8.4
DDX3XO00571 HIPK1-209ENST00000503968 570 ntTSL 49.27□□□□□ -0.931e-6■□□□□ 8.4
DDX3XO00571 VCL-206ENST00000623461 7995 ntTSL 1 (best)9.2□□□□□ -0.943e-26■□□□□ 8.4
DDX3XO00571 WDYHV1-207ENST00000523551 853 ntTSL 39.19□□□□□ -0.941e-6■□□□□ 8.4
DDX3XO00571 HK1-203ENST00000360289 3961 ntTSL 5 BASIC9.13□□□□□ -0.953e-18■□□□□ 8.4
DDX3XO00571 RAB3GAP2-206ENST00000475769 375 ntTSL 38.98□□□□□ -0.972e-11■□□□□ 8.4
DDX3XO00571 HADH-217ENST00000639698 1507 ntTSL 58.84□□□□□ -0.993e-10■□□□□ 8.4
DDX3XO00571 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -12e-12■□□□□ 8.4
DDX3XO00571 PRKAG1-213ENST00000550448 1174 ntTSL 28.72□□□□□ -1.015e-9■□□□□ 8.4
DDX3XO00571 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC8.62□□□□□ -1.037e-8■□□□□ 8.4
DDX3XO00571 PRKAG1-212ENST00000550125 725 ntTSL 58.56□□□□□ -1.045e-9■□□□□ 8.4
DDX3XO00571 HK1-204ENST00000421088 707 ntTSL 58.54□□□□□ -1.043e-18■□□□□ 8.4
DDX3XO00571 TIMM21-202ENST00000577952 858 ntTSL 58.27□□□□□ -1.097e-8■□□□□ 8.4
DDX3XO00571 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.137e-8■□□□□ 8.4
DDX3XO00571 HK1-213ENST00000483054 592 ntTSL 37.72□□□□□ -1.173e-18■□□□□ 8.4
DDX3XO00571 OXSM-205ENST00000449808 735 ntTSL 37.6□□□□□ -1.195e-9■□□□□ 8.4
DDX3XO00571 HBS1L-216ENST00000533274 2102 ntTSL 27.42□□□□□ -1.223e-10■□□□□ 8.4
DDX3XO00571 WDYHV1-202ENST00000517609 909 ntTSL 27.39□□□□□ -1.231e-6■□□□□ 8.4
DDX3XO00571 HIPK1-210ENST00000514621 574 ntTSL 47.04□□□□□ -1.281e-6■□□□□ 8.4
DDX3XO00571 PRKAG1-208ENST00000548605 568 ntTSL 56.83□□□□□ -1.325e-9■□□□□ 8.4
DDX3XO00571 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.337e-8■□□□□ 8.4
DDX3XO00571 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.55□□□□□ -1.361e-6■□□□□ 8.4
DDX3XO00571 RCHY1-209ENST00000513083 540 ntTSL 1 (best)6.55□□□□□ -1.361e-6■□□□□ 8.4
DDX3XO00571 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.51□□□□□ -1.375e-9■□□□□ 8.4
DDX3XO00571 STRBP-207ENST00000479114 832 ntTSL 36.4□□□□□ -1.381e-6■□□□□ 8.4
DDX3XO00571 HK1-214ENST00000483077 750 ntTSL 36.22□□□□□ -1.413e-18■□□□□ 8.4
DDX3XO00571 ZSCAN9-203ENST00000526391 757 ntTSL 1 (best)6.18□□□□□ -1.421e-6■□□□□ 8.4
DDX3XO00571 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.16□□□□□ -1.427e-8■□□□□ 8.4
DDX3XO00571 WDYHV1-209ENST00000524254 764 ntTSL 36.01□□□□□ -1.451e-6■□□□□ 8.4
DDX3XO00571 RCHY1-211ENST00000513909 728 ntTSL 35.92□□□□□ -1.461e-6■□□□□ 8.4
DDX3XO00571 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.481e-6■□□□□ 8.4
DDX3XO00571 OXSM-203ENST00000428266 756 ntTSL 25.81□□□□□ -1.485e-9■□□□□ 8.4
DDX3XO00571 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.69□□□□□ -1.51e-6■□□□□ 8.4
DDX3XO00571 HK1-208ENST00000464803 450 ntTSL 1 (best)5.63□□□□□ -1.513e-18■□□□□ 8.4
DDX3XO00571 HK1-210ENST00000476368 605 ntTSL 35.54□□□□□ -1.523e-18■□□□□ 8.4
DDX3XO00571 RCHY1-204ENST00000505105 1304 ntTSL 1 (best)5.28□□□□□ -1.561e-6■□□□□ 8.4
DDX3XO00571 HK1-207ENST00000450646 739 ntTSL 55.1□□□□□ -1.593e-18■□□□□ 8.4
DDX3XO00571 HBS1L-209ENST00000526100 1600 ntTSL 25.08□□□□□ -1.63e-10■□□□□ 8.4
DDX3XO00571 RCHY1-212ENST00000514021 436 ntTSL 34.59□□□□□ -1.671e-6■□□□□ 8.4
DDX3XO00571 PRKAG1-209ENST00000548857 553 ntTSL 44.45□□□□□ -1.75e-9■□□□□ 8.4
DDX3XO00571 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.71e-6■□□□□ 8.4
DDX3XO00571 PRKAG1-219ENST00000552657 553 ntTSL 24.35□□□□□ -1.715e-9■□□□□ 8.4
DDX3XO00571 MYO19-222ENST00000620644 565 ntTSL 44.23□□□□□ -1.735e-16■□□□□ 8.4
DDX3XO00571 PRKAG1-210ENST00000548950 663 ntTSL 54.07□□□□□ -1.765e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-211ENST00000549726 1004 ntTSL 23.66□□□□□ -1.825e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-218ENST00000552463 778 ntTSL 53.66□□□□□ -1.825e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-214ENST00000551121 612 ntTSL 53.65□□□□□ -1.835e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-203ENST00000547082 604 ntTSL 43.3□□□□□ -1.885e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-215ENST00000551696 688 ntTSL 53.27□□□□□ -1.895e-9■□□□□ 8.4
DDX3XO00571 KPNA6-203ENST00000469790 879 ntTSL 27.87□□□□□ -1.152e-8■□□□□ 8.4
DDX3XO00571 WWC2-207ENST00000508614 604 ntTSL 317.62■□□□□ 0.415e-13■□□□□ 8.4
DDX3XO00571 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.135e-13■□□□□ 8.4
DDX3XO00571 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC13.15□□□□□ -0.35e-13■□□□□ 8.4
DDX3XO00571 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC11.66□□□□□ -0.545e-13■□□□□ 8.4
DDX3XO00571 SEM1-214ENST00000613919 610 ntTSL 29.23□□□□□ -0.936e-45■□□□□ 8.4
DDX3XO00571 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.17□□□□□ -0.946e-45■□□□□ 8.4
DDX3XO00571 SEM1-217ENST00000617133 591 ntTSL 26.34□□□□□ -1.396e-45■□□□□ 8.4
DDX3XO00571 SEM1-220ENST00000619259 462 ntTSL 25.5□□□□□ -1.536e-45■□□□□ 8.4
DDX3XO00571 SEM1-219ENST00000618105 544 ntTSL 24.96□□□□□ -1.626e-45■□□□□ 8.4
DDX3XO00571 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.91■■■□□ 2.222e-8■□□□□ 8.3
DDX3XO00571 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.91■■■□□ 2.222e-8■□□□□ 8.3
DDX3XO00571 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.692e-8■□□□□ 8.3
DDX3XO00571 NEK3-202ENST00000550841 569 ntTSL 422.48■■□□□ 1.192e-8■□□□□ 8.3
DDX3XO00571 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.152e-8■□□□□ 8.3
Retrieved 100 of 47,714 protein–RNA pairs in 3864 ms