RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	AEBP2	Q6ZN18	517 aa	Predicted RBP	28.74	■■■□□ 2.19
HIPK1-210	ENST00000514621	CHIC1	Q5VXU3	224 aa		27.67	■■■□□ 2.02
HIPK1-210	ENST00000514621	SENP3	Q9H4L4	574 aa	Predicted RBP	24.42	■■□□□ 1.5
HIPK1-210	ENST00000514621	PHF23	Q9BUL5	403 aa	Predicted RBP	24.31	■■□□□ 1.48
HIPK1-210	ENST00000514621	FOXD1	Q16676	465 aa		22.72	■■□□□ 1.23
HIPK1-210	ENST00000514621	PLPPR3	Q6T4P5	718 aa		22.28	■■□□□ 1.16
HIPK1-210	ENST00000514621	PPP6R1	Q9UPN7	881 aa		21.56	■■□□□ 1.04
HIPK1-210	ENST00000514621	ADRA2B	P18089	450 aa		21.52	■■□□□ 1.04
HIPK1-210	ENST00000514621	PIAS4	Q8N2W9	510 aa	Predicted RBP	21.33	■■□□□ 1.01
HIPK1-210	ENST00000514621	MSH5	O43196	834 aa		21.08	■□□□□ 0.97
HIPK1-210	ENST00000514621	POTED	Q86YR6	584 aa		19.9	■□□□□ 0.78
HIPK1-210	ENST00000514621	SCAF1	Q9H7N4	1312 aa	Known RBP	19.64	■□□□□ 0.73
HIPK1-210	ENST00000514621	MAPK8IP2	Q13387	824 aa	Predicted RBP	19.63	■□□□□ 0.73
HIPK1-210	ENST00000514621	PPP4R3CP	Q6ZMV5	832 aa		19.59	■□□□□ 0.73
HIPK1-210	ENST00000514621	DMRT2	Q9Y5R5	561 aa		19.45	■□□□□ 0.7
HIPK1-210	ENST00000514621	CNKSR2	Q8WXI2	1034 aa		19.12	■□□□□ 0.65
HIPK1-210	ENST00000514621	NCBP3	Q53F19	620 aa	Known RBP	18.93	■□□□□ 0.62
HIPK1-210	ENST00000514621	HOXD11	P31277	338 aa	Predicted RBP	18.89	■□□□□ 0.61
HIPK1-210	ENST00000514621	RNF216	Q9NWF9	866 aa	Predicted RBP	18.85	■□□□□ 0.61
HIPK1-210	ENST00000514621	KCNA4	P22459	653 aa		18.72	■□□□□ 0.59
HIPK1-210	ENST00000514621	NPM3	O75607	178 aa	Known RBP	18.7	■□□□□ 0.58
HIPK1-210	ENST00000514621	DCAF8L1	A6NGE4	600 aa		18.58	■□□□□ 0.56
HIPK1-210	ENST00000514621	DNAJC5B	Q9UF47	199 aa		18.23	■□□□□ 0.51
HIPK1-210	ENST00000514621	RNF39	Q9H2S5	420 aa		18.05	■□□□□ 0.48
HIPK1-210	ENST00000514621	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	17.97	■□□□□ 0.47
HIPK1-210	ENST00000514621	CACNB1	Q02641	598 aa	Predicted RBP	17.82	■□□□□ 0.44
HIPK1-210	ENST00000514621	C1QBP	Q07021	282 aa	Known RBP	17.79	■□□□□ 0.44
HIPK1-210	ENST00000514621	SLC4A2	P04920	1241 aa		17.77	■□□□□ 0.44
HIPK1-210	ENST00000514621	SLC4A1AP	Q9BWU0	796 aa	Known RBP	17.74	■□□□□ 0.43
HIPK1-210	ENST00000514621		U3KPZ7	1027 aa	Predicted RBP	17.68	■□□□□ 0.42
HIPK1-210	ENST00000514621	FOXD4L1	Q9NU39	408 aa		17.33	■□□□□ 0.36
HIPK1-210	ENST00000514621	SPINK5	Q9NQ38	1064 aa	Predicted RBP	17.29	■□□□□ 0.36
HIPK1-210	ENST00000514621	MYCN	P04198	464 aa	Predicted RBP	17.28	■□□□□ 0.36
HIPK1-210	ENST00000514621	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	17.27	■□□□□ 0.36
HIPK1-210	ENST00000514621	HNRNPUL2	Q1KMD3	747 aa	Known RBP	17.27	■□□□□ 0.36
HIPK1-210	ENST00000514621	ZBTB22	O15209	634 aa		17.25	■□□□□ 0.35
HIPK1-210	ENST00000514621	CAPN15	O75808	1086 aa		17.21	■□□□□ 0.35
HIPK1-210	ENST00000514621	SAMD1	Q6SPF0	538 aa	Predicted RBP	17.21	■□□□□ 0.35
HIPK1-210	ENST00000514621	APLP2	Q06481	763 aa		17.17	■□□□□ 0.34
HIPK1-210	ENST00000514621	DSG3	P32926	999 aa		17.04	■□□□□ 0.32
HIPK1-210	ENST00000514621	TRH	P20396	242 aa	Predicted RBP	17.03	■□□□□ 0.32
HIPK1-210	ENST00000514621	ZNF219	Q9P2Y4	722 aa	Predicted RBP	17.02	■□□□□ 0.32
HIPK1-210	ENST00000514621	EHMT2	Q96KQ7	1210 aa		16.9	■□□□□ 0.3
HIPK1-210	ENST00000514621	ABCB7	O75027	752 aa		16.87	■□□□□ 0.29
HIPK1-210	ENST00000514621	ATF5	Q9Y2D1	282 aa	Predicted RBP	16.86	■□□□□ 0.29
HIPK1-210	ENST00000514621	CSRNP3	Q8WYN3	585 aa		16.8	■□□□□ 0.28
HIPK1-210	ENST00000514621	ATXN8OS	P0DMR3	200 aa		16.74	■□□□□ 0.27
HIPK1-210	ENST00000514621	POLA2	Q14181	598 aa		16.68	■□□□□ 0.26
HIPK1-210	ENST00000514621	ZBTB12	Q9Y330	459 aa	Predicted RBP	16.37	■□□□□ 0.21
HIPK1-210	ENST00000514621	RBM42	Q9BTD8	480 aa	Known RBP	16.22	■□□□□ 0.19
HIPK1-210	ENST00000514621	OSCAR	Q8IYS5	282 aa		16.16	■□□□□ 0.18
HIPK1-210	ENST00000514621	FBLN2	P98095	1184 aa		16.14	■□□□□ 0.17
HIPK1-210	ENST00000514621	MKRN4P	Q13434	485 aa	Predicted RBP	16.12	■□□□□ 0.17
HIPK1-210	ENST00000514621	AKT1S1	Q96B36	256 aa		15.94	■□□□□ 0.14
HIPK1-210	ENST00000514621	SPDYE2B	A6NHP3	402 aa		15.91	■□□□□ 0.14
HIPK1-210	ENST00000514621	SPDYE6	P0CI01	402 aa		15.91	■□□□□ 0.14
HIPK1-210	ENST00000514621	SPDYE2	Q495Y8	402 aa		15.91	■□□□□ 0.14
HIPK1-210	ENST00000514621	REM2	Q8IYK8	340 aa	Predicted RBP	15.81	■□□□□ 0.12
HIPK1-210	ENST00000514621	SSUH2	Q9Y2M2	353 aa		15.77	■□□□□ 0.12
HIPK1-210	ENST00000514621	ZNF692	Q9BU19	519 aa	Predicted RBP	15.76	■□□□□ 0.11
HIPK1-210	ENST00000514621	CHRDL2	Q6WN34	429 aa		15.72	■□□□□ 0.11
HIPK1-210	ENST00000514621	POTEH	Q6S545	545 aa		15.66	■□□□□ 0.1
HIPK1-210	ENST00000514621	PITPNM1	O00562	1244 aa		15.65	■□□□□ 0.1
HIPK1-210	ENST00000514621	PABPN1	Q86U42	306 aa	Known RBP eCLIP	15.57	■□□□□ 0.08
HIPK1-210	ENST00000514621	NISCH	Q9Y2I1	1504 aa		15.54	■□□□□ 0.08
HIPK1-210	ENST00000514621	SPDYE4	A6NLX3	237 aa		15.54	■□□□□ 0.08
HIPK1-210	ENST00000514621	SPDYE1	Q8NFV5	336 aa	Predicted RBP	15.52	■□□□□ 0.08
HIPK1-210	ENST00000514621	PIP4P2	Q8N4L2	257 aa		15.45	■□□□□ 0.06
HIPK1-210	ENST00000514621	CLEC11A	Q9Y240	323 aa		15.45	■□□□□ 0.06
HIPK1-210	ENST00000514621	FXR2	P51116	673 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
HIPK1-210	ENST00000514621	PROM2	Q8N271	834 aa		15.27	■□□□□ 0.04
HIPK1-210	ENST00000514621	PRR29	P0C7W0	189 aa		15.26	■□□□□ 0.03
HIPK1-210	ENST00000514621	PRKAR2A	P13861	404 aa	Known RBP	15.22	■□□□□ 0.03
HIPK1-210	ENST00000514621	FKBP8	Q14318	412 aa		15.22	■□□□□ 0.03
HIPK1-210	ENST00000514621	STAG3	Q9UJ98	1225 aa		15.19	■□□□□ 0.02
HIPK1-210	ENST00000514621	CHADL	Q6NUI6	762 aa		15.14	■□□□□ 0.01
HIPK1-210	ENST00000514621	CREBZF	Q9NS37	354 aa		15.02	■□□□□ -0
HIPK1-210	ENST00000514621	HAX1	O00165	279 aa		15.01	□□□□□ -0.01
HIPK1-210	ENST00000514621	FARP1	Q9Y4F1	1045 aa	Predicted RBP	14.97	□□□□□ -0.01
HIPK1-210	ENST00000514621	C19orf67	A6NJJ6	358 aa		14.91	□□□□□ -0.02
HIPK1-210	ENST00000514621	EVX2	Q03828	476 aa		14.9	□□□□□ -0.02
HIPK1-210	ENST00000514621	SP7	Q8TDD2	431 aa	Predicted RBP	14.88	□□□□□ -0.03
HIPK1-210	ENST00000514621	MNX1	P50219	401 aa	Predicted RBP	14.83	□□□□□ -0.04
HIPK1-210	ENST00000514621	FBXO3	Q9UK99	471 aa		14.81	□□□□□ -0.04
HIPK1-210	ENST00000514621	CD44	P16070	742 aa	Known RBP	14.77	□□□□□ -0.05
HIPK1-210	ENST00000514621	MIER1	Q8N108	512 aa		14.74	□□□□□ -0.05
HIPK1-210	ENST00000514621	NPM1	P06748	294 aa	Known RBP eCLIP	14.71	□□□□□ -0.05
HIPK1-210	ENST00000514621	PLCD3	Q8N3E9	789 aa		14.69	□□□□□ -0.06
HIPK1-210	ENST00000514621	PLEKHG5	O94827	1062 aa		14.68	□□□□□ -0.06
HIPK1-210	ENST00000514621	ZRANB1	Q9UGI0	708 aa		14.62	□□□□□ -0.07
HIPK1-210	ENST00000514621	VASP	P50552	380 aa	Predicted RBP	14.59	□□□□□ -0.07
HIPK1-210	ENST00000514621	ZNF579	Q8NAF0	562 aa	Known RBP	14.58	□□□□□ -0.08
HIPK1-210	ENST00000514621	GABBR2	O75899	941 aa		14.57	□□□□□ -0.08
HIPK1-210	ENST00000514621	PAK3	O75914	559 aa	Predicted RBP	14.56	□□□□□ -0.08
HIPK1-210	ENST00000514621	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.55	□□□□□ -0.08
HIPK1-210	ENST00000514621	RASEF	Q8IZ41	740 aa		14.5	□□□□□ -0.09
HIPK1-210	ENST00000514621	PHF12	Q96QT6	1004 aa		14.48	□□□□□ -0.09
HIPK1-210	ENST00000514621	TSPYL2	Q9H2G4	693 aa	Predicted RBP	14.48	□□□□□ -0.09
HIPK1-210	ENST00000514621	NUBP1	P53384	320 aa		14.46	□□□□□ -0.09
HIPK1-210	ENST00000514621	CLCN6	P51797	869 aa		14.45	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms