Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 RASA4CP-201ENST00000424092 1398 ntBASIC24.17■■□□□ 1.46
CLIC4Q9Y696 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.17■■□□□ 1.46
CLIC4Q9Y696 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.16■■□□□ 1.46
CLIC4Q9Y696 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.16■■□□□ 1.46
CLIC4Q9Y696 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 AL049796.1-201ENST00000565336 1766 ntBASIC24.15■■□□□ 1.46
CLIC4Q9Y696 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 AC009237.3-201ENST00000393279 1427 ntBASIC24.15■■□□□ 1.46
CLIC4Q9Y696 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CLIC4Q9Y696 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CLIC4Q9Y696 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
CLIC4Q9Y696 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 MIR572-201ENST00000384983 95 ntBASIC24.14■■□□□ 1.45
CLIC4Q9Y696 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 SUDS3P1-201ENST00000505831 966 ntBASIC24.14■■□□□ 1.45
CLIC4Q9Y696 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 AC005224.4-201ENST00000583262 1652 ntBASIC24.14■■□□□ 1.45
CLIC4Q9Y696 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.14■■□□□ 1.45
CLIC4Q9Y696 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 AC091305.1-201ENST00000479476 895 ntBASIC24.13■■□□□ 1.45
CLIC4Q9Y696 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 BX005040.4-201ENST00000637145 1518 ntBASIC24.13■■□□□ 1.45
CLIC4Q9Y696 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLIC4Q9Y696 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLIC4Q9Y696 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.11■■□□□ 1.45
CLIC4Q9Y696 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CLIC4Q9Y696 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 AL139246.5-201ENST00000606645 996 ntBASIC24.1■■□□□ 1.45
CLIC4Q9Y696 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLIC4Q9Y696 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms