Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 AC005224.4-201ENST00000583262 1652 ntBASIC20.35■□□□□ 0.85
PCDHGA6Q9Y5G7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 AC011767.1-201ENST00000617410 1153 ntBASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA6Q9Y5G7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 CROCCP5-201ENST00000436658 830 ntBASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 AC006970.2-201ENST00000450065 779 ntBASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 AC104771.1-201ENST00000603335 964 ntBASIC20.33■□□□□ 0.85
PCDHGA6Q9Y5G7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA6Q9Y5G7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA6Q9Y5G7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PCDHGA6Q9Y5G7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGA6Q9Y5G7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA6Q9Y5G7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 KRT87P-202ENST00000534226 1464 ntBASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 NCF1B-203ENST00000435988 1254 ntBASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGA6Q9Y5G7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA6Q9Y5G7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGA6Q9Y5G7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms