Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 AC093787.1-201ENST00000450396 207 ntBASIC22.19■■□□□ 1.14
YIPF1Q9Y548 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 KRT18P6-201ENST00000555540 1265 ntBASIC22.19■■□□□ 1.14
YIPF1Q9Y548 AC016405.3-201ENST00000607710 860 ntBASIC22.19■■□□□ 1.14
YIPF1Q9Y548 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 OR10C1-204ENST00000622521 1039 ntBASIC22.19■■□□□ 1.14
YIPF1Q9Y548 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
YIPF1Q9Y548 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 AC026471.6-201ENST00000622954 1905 ntBASIC22.18■■□□□ 1.14
YIPF1Q9Y548 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 AC069236.1-201ENST00000604339 616 ntBASIC22.18■■□□□ 1.14
YIPF1Q9Y548 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
YIPF1Q9Y548 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 MKRN4P-201ENST00000444706 1521 ntBASIC22.17■■□□□ 1.14
YIPF1Q9Y548 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 AC008694.1-202ENST00000636953 945 ntBASIC22.17■■□□□ 1.14
YIPF1Q9Y548 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 AC133041.1-202ENST00000642053 222 ntBASIC22.17■■□□□ 1.14
YIPF1Q9Y548 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
YIPF1Q9Y548 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 AC073210.2-201ENST00000430369 194 ntBASIC22.16■■□□□ 1.14
YIPF1Q9Y548 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
YIPF1Q9Y548 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 MIPEPP3-201ENST00000412105 444 ntBASIC22.15■■□□□ 1.14
YIPF1Q9Y548 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 AC243732.1-201ENST00000612648 864 ntBASIC22.15■■□□□ 1.14
YIPF1Q9Y548 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
YIPF1Q9Y548 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
YIPF1Q9Y548 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
YIPF1Q9Y548 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
YIPF1Q9Y548 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
YIPF1Q9Y548 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.14■■□□□ 1.13
YIPF1Q9Y548 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
YIPF1Q9Y548 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
YIPF1Q9Y548 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
YIPF1Q9Y548 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.13■■□□□ 1.13
YIPF1Q9Y548 MIR4758-201ENST00000577688 71 ntBASIC22.13■■□□□ 1.13
YIPF1Q9Y548 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms