Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 AC079089.2-201ENST00000531211 1277 ntBASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.84■■□□□ 1.73
ZC3H4Q9UPT8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 KRT16P2-201ENST00000414673 1423 ntBASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.83■■□□□ 1.73
ZC3H4Q9UPT8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
ZC3H4Q9UPT8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
ZC3H4Q9UPT8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.72
ZC3H4Q9UPT8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H4Q9UPT8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H4Q9UPT8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ZC3H4Q9UPT8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 LINC00543-201ENST00000567234 1845 ntBASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 KRT17P2-201ENST00000300992 1314 ntBASIC25.81■■□□□ 1.72
ZC3H4Q9UPT8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 AC022211.4-201ENST00000625094 2161 ntBASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 AC233702.5-201ENST00000584107 538 ntBASIC25.8■■□□□ 1.72
ZC3H4Q9UPT8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ZC3H4Q9UPT8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 PNMA6B-201ENST00000538162 1200 ntBASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.78■■□□□ 1.72
ZC3H4Q9UPT8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 AC069544.1-201ENST00000609399 999 ntBASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 AC097493.4-201ENST00000641197 219 ntBASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ZC3H4Q9UPT8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 AP006587.3-201ENST00000525742 1516 ntBASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
ZC3H4Q9UPT8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms