Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LHX6Q9UPM6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LHX6Q9UPM6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20■□□□□ 0.79
LHX6Q9UPM6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
LHX6Q9UPM6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LHX6Q9UPM6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20■□□□□ 0.79
LHX6Q9UPM6 AC007322.4-201ENST00000509611 723 ntBASIC20■□□□□ 0.79
LHX6Q9UPM6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20■□□□□ 0.79
LHX6Q9UPM6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20■□□□□ 0.79
LHX6Q9UPM6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LHX6Q9UPM6 AC079630.1-202ENST00000618127 1840 ntBASIC19.99■□□□□ 0.79
LHX6Q9UPM6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 PRKY-204ENST00000533551 1019 ntBASIC19.99■□□□□ 0.79
LHX6Q9UPM6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LHX6Q9UPM6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 TMPOP1-202ENST00000424642 1267 ntBASIC19.98■□□□□ 0.79
LHX6Q9UPM6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.98■□□□□ 0.79
LHX6Q9UPM6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 AC009237.3-201ENST00000393279 1427 ntBASIC19.97■□□□□ 0.79
LHX6Q9UPM6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 AC010141.2-201ENST00000452426 721 ntBASIC19.97■□□□□ 0.79
LHX6Q9UPM6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 KRT17P2-201ENST00000300992 1314 ntBASIC19.97■□□□□ 0.79
LHX6Q9UPM6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX6Q9UPM6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.96■□□□□ 0.79
LHX6Q9UPM6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.96■□□□□ 0.79
LHX6Q9UPM6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 CLDN5-201ENST00000403084 2357 ntBASIC19.96■□□□□ 0.79
LHX6Q9UPM6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LHX6Q9UPM6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX6Q9UPM6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms