Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNOT6Q9ULM6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 AC022517.1-201ENST00000592429 346 ntBASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNOT6Q9ULM6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 AC092666.2-201ENST00000613287 246 ntBASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNOT6Q9ULM6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 AC026471.6-201ENST00000622954 1905 ntBASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT6Q9ULM6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.14■□□□□ 0.98
CNOT6Q9ULM6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT6Q9ULM6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT6Q9ULM6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT6Q9ULM6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT6Q9ULM6 KRT87P-202ENST00000534226 1464 ntBASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 C11orf96-202ENST00000528572 1834 ntBASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT6Q9ULM6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT6Q9ULM6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT6Q9ULM6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms