Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNOT11Q9UKZ1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT11Q9UKZ1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT11Q9UKZ1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
CNOT11Q9UKZ1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 AC004687.1-201ENST00000579003 1625 ntBASIC20.24■□□□□ 0.83
CNOT11Q9UKZ1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT11Q9UKZ1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT11Q9UKZ1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 AC126544.1-201ENST00000580842 1059 ntBASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CNOT11Q9UKZ1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms