Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 MIR718-201ENST00000390190 70 ntBASIC31.84■■■□□ 2.69
MLH3Q9UHC1 LSM12P1-201ENST00000411836 588 ntBASIC31.84■■■□□ 2.69
MLH3Q9UHC1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
MLH3Q9UHC1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC31.83■■■□□ 2.69
MLH3Q9UHC1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
MLH3Q9UHC1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 FAM21FP-204ENST00000608637 956 ntBASIC31.82■■■□□ 2.68
MLH3Q9UHC1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC31.82■■■□□ 2.68
MLH3Q9UHC1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.81■■■□□ 2.68
MLH3Q9UHC1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 RPPH1-201ENST00000516869 333 ntBASIC31.8■■■□□ 2.68
MLH3Q9UHC1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 AC100791.3-201ENST00000617619 330 ntBASIC31.8■■■□□ 2.68
MLH3Q9UHC1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
MLH3Q9UHC1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 CYP2T3P-201ENST00000601990 817 ntBASIC31.79■■■□□ 2.68
MLH3Q9UHC1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
MLH3Q9UHC1 AC061975.6-201ENST00000579045 1553 ntBASIC31.79■■■□□ 2.68
MLH3Q9UHC1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 AL355472.2-201ENST00000422958 438 ntBASIC31.78■■■□□ 2.68
MLH3Q9UHC1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC31.78■■■□□ 2.68
MLH3Q9UHC1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC31.77■■■□□ 2.68
MLH3Q9UHC1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.76■■■□□ 2.68
MLH3Q9UHC1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
MLH3Q9UHC1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.67
MLH3Q9UHC1 PNMA6B-201ENST00000538162 1200 ntBASIC31.76■■■□□ 2.67
MLH3Q9UHC1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
MLH3Q9UHC1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
MLH3Q9UHC1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
MLH3Q9UHC1 AC091799.1-201ENST00000422823 811 ntBASIC31.75■■■□□ 2.67
MLH3Q9UHC1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
MLH3Q9UHC1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.75■■■□□ 2.67
MLH3Q9UHC1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms