Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHL42Q9P2K6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHL42Q9P2K6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHL42Q9P2K6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 AC138907.5-202ENST00000569484 235 ntBASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
KLHL42Q9P2K6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KLHL42Q9P2K6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.65■□□□□ 0.9
KLHL42Q9P2K6 CCDC92B-201ENST00000575506 885 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms