Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLGN3Q9NZ94 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
NLGN3Q9NZ94 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 MIR4758-201ENST00000577688 71 ntBASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 AC137767.1-201ENST00000602918 1920 ntBASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.7■□□□□ 0.9
NLGN3Q9NZ94 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 OR10C1-204ENST00000622521 1039 ntBASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLGN3Q9NZ94 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 POU5F1P4-201ENST00000413175 1085 ntBASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 AC069236.1-201ENST00000604339 616 ntBASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 AC008694.1-202ENST00000636953 945 ntBASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 MKRN4P-201ENST00000444706 1521 ntBASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLGN3Q9NZ94 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 AC087742.1-201ENST00000575880 1738 ntBASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 AC098934.4-201ENST00000564127 592 ntBASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLGN3Q9NZ94 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 MIR4651-201ENST00000582622 73 ntBASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLGN3Q9NZ94 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms